Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trim52Q8CDV4 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC20.68■□□□□ 0.9
Trim52Q8CDV4 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim52Q8CDV4 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trim52Q8CDV4 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.68■□□□□ 0.9
Trim52Q8CDV4 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim52Q8CDV4 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim52Q8CDV4 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim52Q8CDV4 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim52Q8CDV4 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim52Q8CDV4 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim52Q8CDV4 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim52Q8CDV4 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim52Q8CDV4 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim52Q8CDV4 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim52Q8CDV4 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.68■□□□□ 0.9
Trim52Q8CDV4 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Trim52Q8CDV4 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.67■□□□□ 0.9
Trim52Q8CDV4 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trim52Q8CDV4 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim52Q8CDV4 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim52Q8CDV4 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim52Q8CDV4 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim52Q8CDV4 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trim52Q8CDV4 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
Trim52Q8CDV4 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC20.67■□□□□ 0.9
Trim52Q8CDV4 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC20.67■□□□□ 0.9
Trim52Q8CDV4 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC20.67■□□□□ 0.9
Trim52Q8CDV4 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
Trim52Q8CDV4 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim52Q8CDV4 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Trim52Q8CDV4 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim52Q8CDV4 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.66■□□□□ 0.9
Trim52Q8CDV4 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trim52Q8CDV4 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim52Q8CDV4 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim52Q8CDV4 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim52Q8CDV4 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Trim52Q8CDV4 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim52Q8CDV4 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim52Q8CDV4 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim52Q8CDV4 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Trim52Q8CDV4 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trim52Q8CDV4 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim52Q8CDV4 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
Trim52Q8CDV4 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
Trim52Q8CDV4 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim52Q8CDV4 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC20.65■□□□□ 0.9
Trim52Q8CDV4 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC20.65■□□□□ 0.9
Trim52Q8CDV4 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC20.65■□□□□ 0.9
Trim52Q8CDV4 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC20.65■□□□□ 0.9
Trim52Q8CDV4 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
Trim52Q8CDV4 Cmtm5-203ENSMUST00000227441 610 ntBASIC20.65■□□□□ 0.9
Trim52Q8CDV4 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim52Q8CDV4 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim52Q8CDV4 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trim52Q8CDV4 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim52Q8CDV4 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Trim52Q8CDV4 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trim52Q8CDV4 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.9
Trim52Q8CDV4 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.64■□□□□ 0.9
Trim52Q8CDV4 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trim52Q8CDV4 Gm9889-202ENSMUST00000206983 1577 ntBASIC20.64■□□□□ 0.9
Trim52Q8CDV4 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim52Q8CDV4 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim52Q8CDV4 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC20.64■□□□□ 0.89
Trim52Q8CDV4 Gm11452-201ENSMUST00000122376 690 ntBASIC20.64■□□□□ 0.89
Trim52Q8CDV4 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Trim52Q8CDV4 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Trim52Q8CDV4 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC20.64■□□□□ 0.89
Trim52Q8CDV4 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC20.64■□□□□ 0.89
Trim52Q8CDV4 AC160338.1-201ENSMUST00000214232 705 ntBASIC20.64■□□□□ 0.89
Trim52Q8CDV4 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim52Q8CDV4 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim52Q8CDV4 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim52Q8CDV4 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Trim52Q8CDV4 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Trim52Q8CDV4 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim52Q8CDV4 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC20.63■□□□□ 0.89
Trim52Q8CDV4 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim52Q8CDV4 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim52Q8CDV4 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC20.63■□□□□ 0.89
Trim52Q8CDV4 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim52Q8CDV4 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Trim52Q8CDV4 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC20.63■□□□□ 0.89
Trim52Q8CDV4 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim52Q8CDV4 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim52Q8CDV4 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Trim52Q8CDV4 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim52Q8CDV4 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC20.63■□□□□ 0.89
Trim52Q8CDV4 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim52Q8CDV4 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim52Q8CDV4 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim52Q8CDV4 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim52Q8CDV4 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC20.62■□□□□ 0.89
Trim52Q8CDV4 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trim52Q8CDV4 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC20.62■□□□□ 0.89
Trim52Q8CDV4 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim52Q8CDV4 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trim52Q8CDV4 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms