Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc38Q8CDN8 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc38Q8CDN8 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc38Q8CDN8 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc38Q8CDN8 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc38Q8CDN8 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.61■□□□□ 0.57
Ccdc38Q8CDN8 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc38Q8CDN8 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc38Q8CDN8 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc38Q8CDN8 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc38Q8CDN8 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc38Q8CDN8 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.61■□□□□ 0.57
Ccdc38Q8CDN8 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Ccdc38Q8CDN8 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc38Q8CDN8 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc38Q8CDN8 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc38Q8CDN8 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc38Q8CDN8 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc38Q8CDN8 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc38Q8CDN8 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc38Q8CDN8 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Ccdc38Q8CDN8 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc38Q8CDN8 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc38Q8CDN8 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc38Q8CDN8 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc38Q8CDN8 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC18.6■□□□□ 0.57
Ccdc38Q8CDN8 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc38Q8CDN8 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc38Q8CDN8 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Ccdc38Q8CDN8 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc38Q8CDN8 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc38Q8CDN8 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc38Q8CDN8 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Ccdc38Q8CDN8 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Ccdc38Q8CDN8 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc38Q8CDN8 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc38Q8CDN8 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc38Q8CDN8 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.6■□□□□ 0.57
Ccdc38Q8CDN8 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc38Q8CDN8 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc38Q8CDN8 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc38Q8CDN8 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Ccdc38Q8CDN8 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc38Q8CDN8 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc38Q8CDN8 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Ccdc38Q8CDN8 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc38Q8CDN8 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.6■□□□□ 0.57
Ccdc38Q8CDN8 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc38Q8CDN8 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc38Q8CDN8 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc38Q8CDN8 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Ccdc38Q8CDN8 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.59■□□□□ 0.57
Ccdc38Q8CDN8 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc38Q8CDN8 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc38Q8CDN8 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc38Q8CDN8 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc38Q8CDN8 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc38Q8CDN8 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc38Q8CDN8 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc38Q8CDN8 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ccdc38Q8CDN8 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Ccdc38Q8CDN8 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.58■□□□□ 0.57
Ccdc38Q8CDN8 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Ccdc38Q8CDN8 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Ccdc38Q8CDN8 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ccdc38Q8CDN8 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC18.58■□□□□ 0.57
Ccdc38Q8CDN8 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ccdc38Q8CDN8 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ccdc38Q8CDN8 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.58■□□□□ 0.56
Ccdc38Q8CDN8 Gm18958-201ENSMUST00000174258 762 ntBASIC18.58■□□□□ 0.56
Ccdc38Q8CDN8 Gm22240-201ENSMUST00000175225 82 ntBASIC18.58■□□□□ 0.56
Ccdc38Q8CDN8 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.58■□□□□ 0.56
Ccdc38Q8CDN8 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc38Q8CDN8 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc38Q8CDN8 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc38Q8CDN8 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc38Q8CDN8 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.58■□□□□ 0.56
Ccdc38Q8CDN8 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc38Q8CDN8 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Ccdc38Q8CDN8 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Ccdc38Q8CDN8 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.58■□□□□ 0.56
Ccdc38Q8CDN8 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccdc38Q8CDN8 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Ccdc38Q8CDN8 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Ccdc38Q8CDN8 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc38Q8CDN8 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc38Q8CDN8 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc38Q8CDN8 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc38Q8CDN8 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Ccdc38Q8CDN8 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc38Q8CDN8 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc38Q8CDN8 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc38Q8CDN8 Mir5122-201ENSMUST00000175004 89 ntBASIC18.57■□□□□ 0.56
Ccdc38Q8CDN8 Gm27011-201ENSMUST00000182352 972 ntBASIC18.57■□□□□ 0.56
Ccdc38Q8CDN8 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc38Q8CDN8 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc38Q8CDN8 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc38Q8CDN8 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC18.57■□□□□ 0.56
Ccdc38Q8CDN8 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccdc38Q8CDN8 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms