Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lysmd4Q8CC84 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lysmd4Q8CC84 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lysmd4Q8CC84 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lysmd4Q8CC84 Gm2559-201ENSMUST00000201323 363 ntBASIC15.07■□□□□ 0
Lysmd4Q8CC84 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC15.07■□□□□ 0
Lysmd4Q8CC84 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.07■□□□□ 0
Lysmd4Q8CC84 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lysmd4Q8CC84 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lysmd4Q8CC84 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lysmd4Q8CC84 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lysmd4Q8CC84 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.07■□□□□ 0
Lysmd4Q8CC84 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lysmd4Q8CC84 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Lysmd4Q8CC84 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Lysmd4Q8CC84 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Lysmd4Q8CC84 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Lysmd4Q8CC84 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.06■□□□□ 0
Lysmd4Q8CC84 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.06■□□□□ 0
Lysmd4Q8CC84 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lysmd4Q8CC84 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lysmd4Q8CC84 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.06■□□□□ 0
Lysmd4Q8CC84 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Lysmd4Q8CC84 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.06■□□□□ 0
Lysmd4Q8CC84 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Lysmd4Q8CC84 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Lysmd4Q8CC84 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.06■□□□□ 0
Lysmd4Q8CC84 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC15.06■□□□□ 0
Lysmd4Q8CC84 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lysmd4Q8CC84 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.06■□□□□ 0
Lysmd4Q8CC84 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lysmd4Q8CC84 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lysmd4Q8CC84 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.06■□□□□ 0
Lysmd4Q8CC84 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Lysmd4Q8CC84 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Lysmd4Q8CC84 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lysmd4Q8CC84 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.06■□□□□ 0
Lysmd4Q8CC84 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Lysmd4Q8CC84 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.06■□□□□ 0
Lysmd4Q8CC84 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lysmd4Q8CC84 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.06■□□□□ 0
Lysmd4Q8CC84 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Lysmd4Q8CC84 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Lysmd4Q8CC84 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Lysmd4Q8CC84 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Lysmd4Q8CC84 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Lysmd4Q8CC84 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Lysmd4Q8CC84 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Lysmd4Q8CC84 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Lysmd4Q8CC84 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Lysmd4Q8CC84 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Lysmd4Q8CC84 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Lysmd4Q8CC84 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Lysmd4Q8CC84 Gm24841-201ENSMUST00000158676 357 ntBASIC15.05■□□□□ -0
Lysmd4Q8CC84 Gm44672-201ENSMUST00000206944 1098 ntBASIC15.05■□□□□ -0
Lysmd4Q8CC84 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC15.05■□□□□ -0
Lysmd4Q8CC84 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC15.05■□□□□ -0
Lysmd4Q8CC84 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC15.05■□□□□ -0
Lysmd4Q8CC84 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.05■□□□□ -0
Lysmd4Q8CC84 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Lysmd4Q8CC84 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Lysmd4Q8CC84 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Lysmd4Q8CC84 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Lysmd4Q8CC84 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.05■□□□□ -0
Lysmd4Q8CC84 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.05■□□□□ -0
Lysmd4Q8CC84 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Lysmd4Q8CC84 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Lysmd4Q8CC84 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Lysmd4Q8CC84 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Lysmd4Q8CC84 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Lysmd4Q8CC84 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.05■□□□□ -0
Lysmd4Q8CC84 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
Lysmd4Q8CC84 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Lysmd4Q8CC84 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lysmd4Q8CC84 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.04■□□□□ -0
Lysmd4Q8CC84 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.04■□□□□ -0
Lysmd4Q8CC84 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lysmd4Q8CC84 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Lysmd4Q8CC84 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.04■□□□□ -0
Lysmd4Q8CC84 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lysmd4Q8CC84 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Lysmd4Q8CC84 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Lysmd4Q8CC84 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC15.04■□□□□ -0
Lysmd4Q8CC84 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.04■□□□□ -0
Lysmd4Q8CC84 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lysmd4Q8CC84 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Lysmd4Q8CC84 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC15.04■□□□□ -0
Lysmd4Q8CC84 Gm18025-201ENSMUST00000221733 862 ntBASIC15.04■□□□□ -0
Lysmd4Q8CC84 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Lysmd4Q8CC84 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Lysmd4Q8CC84 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Lysmd4Q8CC84 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lysmd4Q8CC84 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lysmd4Q8CC84 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Lysmd4Q8CC84 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lysmd4Q8CC84 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lysmd4Q8CC84 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lysmd4Q8CC84 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lysmd4Q8CC84 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Lysmd4Q8CC84 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms