Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Rfx6Q8C7R7 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rfx6Q8C7R7 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
Rfx6Q8C7R7 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rfx6Q8C7R7 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rfx6Q8C7R7 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rfx6Q8C7R7 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rfx6Q8C7R7 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rfx6Q8C7R7 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rfx6Q8C7R7 Gm18666-201ENSMUST00000190039 958 ntBASIC17.08■□□□□ 0.32
Rfx6Q8C7R7 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rfx6Q8C7R7 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rfx6Q8C7R7 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Rfx6Q8C7R7 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rfx6Q8C7R7 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rfx6Q8C7R7 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rfx6Q8C7R7 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx6Q8C7R7 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Rfx6Q8C7R7 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx6Q8C7R7 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx6Q8C7R7 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx6Q8C7R7 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx6Q8C7R7 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx6Q8C7R7 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx6Q8C7R7 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx6Q8C7R7 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx6Q8C7R7 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx6Q8C7R7 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx6Q8C7R7 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx6Q8C7R7 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx6Q8C7R7 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx6Q8C7R7 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx6Q8C7R7 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.07■□□□□ 0.32
Rfx6Q8C7R7 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.07■□□□□ 0.32
Rfx6Q8C7R7 Gm43183-201ENSMUST00000200632 547 ntBASIC17.07■□□□□ 0.32
Rfx6Q8C7R7 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.07■□□□□ 0.32
Rfx6Q8C7R7 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
Rfx6Q8C7R7 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx6Q8C7R7 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx6Q8C7R7 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx6Q8C7R7 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.07■□□□□ 0.32
Rfx6Q8C7R7 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx6Q8C7R7 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx6Q8C7R7 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rfx6Q8C7R7 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx6Q8C7R7 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx6Q8C7R7 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Rfx6Q8C7R7 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx6Q8C7R7 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx6Q8C7R7 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.06■□□□□ 0.32
Rfx6Q8C7R7 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx6Q8C7R7 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Rfx6Q8C7R7 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx6Q8C7R7 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx6Q8C7R7 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.06■□□□□ 0.32
Rfx6Q8C7R7 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx6Q8C7R7 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC17.06■□□□□ 0.32
Rfx6Q8C7R7 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx6Q8C7R7 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx6Q8C7R7 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Rfx6Q8C7R7 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
Rfx6Q8C7R7 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx6Q8C7R7 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx6Q8C7R7 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.06■□□□□ 0.32
Rfx6Q8C7R7 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx6Q8C7R7 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.06■□□□□ 0.32
Rfx6Q8C7R7 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Rfx6Q8C7R7 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rfx6Q8C7R7 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx6Q8C7R7 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx6Q8C7R7 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx6Q8C7R7 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx6Q8C7R7 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx6Q8C7R7 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Rfx6Q8C7R7 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx6Q8C7R7 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx6Q8C7R7 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx6Q8C7R7 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.05■□□□□ 0.32
Rfx6Q8C7R7 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx6Q8C7R7 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx6Q8C7R7 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx6Q8C7R7 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx6Q8C7R7 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx6Q8C7R7 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.05■□□□□ 0.32
Rfx6Q8C7R7 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Rfx6Q8C7R7 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.05■□□□□ 0.32
Rfx6Q8C7R7 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Rfx6Q8C7R7 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx6Q8C7R7 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Rfx6Q8C7R7 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx6Q8C7R7 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx6Q8C7R7 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx6Q8C7R7 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rfx6Q8C7R7 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx6Q8C7R7 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx6Q8C7R7 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx6Q8C7R7 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx6Q8C7R7 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Rfx6Q8C7R7 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rfx6Q8C7R7 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms