Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.06■□□□□ 0.16
Cfap54Q8C6S9 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cfap54Q8C6S9 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cfap54Q8C6S9 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cfap54Q8C6S9 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cfap54Q8C6S9 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cfap54Q8C6S9 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cfap54Q8C6S9 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC16.06■□□□□ 0.16
Cfap54Q8C6S9 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cfap54Q8C6S9 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cfap54Q8C6S9 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cfap54Q8C6S9 Gm13312-201ENSMUST00000119631 718 ntBASIC16.06■□□□□ 0.16
Cfap54Q8C6S9 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cfap54Q8C6S9 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Cfap54Q8C6S9 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.06■□□□□ 0.16
Cfap54Q8C6S9 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cfap54Q8C6S9 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Cfap54Q8C6S9 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cfap54Q8C6S9 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cfap54Q8C6S9 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cfap54Q8C6S9 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cfap54Q8C6S9 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cfap54Q8C6S9 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Cfap54Q8C6S9 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cfap54Q8C6S9 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cfap54Q8C6S9 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Cfap54Q8C6S9 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.05■□□□□ 0.16
Cfap54Q8C6S9 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Cfap54Q8C6S9 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cfap54Q8C6S9 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cfap54Q8C6S9 Gm15590-201ENSMUST00000078419 552 ntBASIC16.05■□□□□ 0.16
Cfap54Q8C6S9 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cfap54Q8C6S9 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cfap54Q8C6S9 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cfap54Q8C6S9 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.05■□□□□ 0.16
Cfap54Q8C6S9 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cfap54Q8C6S9 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC16.05■□□□□ 0.16
Cfap54Q8C6S9 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.05■□□□□ 0.16
Cfap54Q8C6S9 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cfap54Q8C6S9 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cfap54Q8C6S9 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cfap54Q8C6S9 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cfap54Q8C6S9 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cfap54Q8C6S9 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.05■□□□□ 0.16
Cfap54Q8C6S9 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cfap54Q8C6S9 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC16.05■□□□□ 0.16
Cfap54Q8C6S9 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cfap54Q8C6S9 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cfap54Q8C6S9 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cfap54Q8C6S9 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cfap54Q8C6S9 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cfap54Q8C6S9 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.04■□□□□ 0.16
Cfap54Q8C6S9 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.04■□□□□ 0.16
Cfap54Q8C6S9 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cfap54Q8C6S9 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cfap54Q8C6S9 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cfap54Q8C6S9 Gm27000-201ENSMUST00000182943 842 ntBASIC16.04■□□□□ 0.16
Cfap54Q8C6S9 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cfap54Q8C6S9 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.04■□□□□ 0.16
Cfap54Q8C6S9 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Cfap54Q8C6S9 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cfap54Q8C6S9 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cfap54Q8C6S9 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Cfap54Q8C6S9 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cfap54Q8C6S9 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cfap54Q8C6S9 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cfap54Q8C6S9 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cfap54Q8C6S9 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cfap54Q8C6S9 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cfap54Q8C6S9 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Cfap54Q8C6S9 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cfap54Q8C6S9 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC16.03■□□□□ 0.16
Cfap54Q8C6S9 Gm18421-201ENSMUST00000204122 625 ntBASIC16.03■□□□□ 0.16
Cfap54Q8C6S9 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cfap54Q8C6S9 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cfap54Q8C6S9 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cfap54Q8C6S9 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Cfap54Q8C6S9 Gm10576-201ENSMUST00000191927 825 ntBASIC16.03■□□□□ 0.16
Cfap54Q8C6S9 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cfap54Q8C6S9 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.03■□□□□ 0.16
Cfap54Q8C6S9 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cfap54Q8C6S9 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cfap54Q8C6S9 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cfap54Q8C6S9 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cfap54Q8C6S9 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cfap54Q8C6S9 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cfap54Q8C6S9 Gm12260-201ENSMUST00000122447 411 ntBASIC16.02■□□□□ 0.16
Cfap54Q8C6S9 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cfap54Q8C6S9 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cfap54Q8C6S9 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC16.02■□□□□ 0.16
Cfap54Q8C6S9 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cfap54Q8C6S9 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cfap54Q8C6S9 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Cfap54Q8C6S9 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cfap54Q8C6S9 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cfap54Q8C6S9 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cfap54Q8C6S9 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.02■□□□□ 0.15
Cfap54Q8C6S9 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cfap54Q8C6S9 Gm6550-201ENSMUST00000187574 993 ntBASIC16.02■□□□□ 0.15
Cfap54Q8C6S9 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.02■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms