Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Col6a6Q8C6K9 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.08■□□□□ 0
Col6a6Q8C6K9 Gm6296-201ENSMUST00000222599 943 ntBASIC15.08■□□□□ 0
Col6a6Q8C6K9 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Col6a6Q8C6K9 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.08■□□□□ 0
Col6a6Q8C6K9 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC15.08■□□□□ 0
Col6a6Q8C6K9 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.08■□□□□ 0
Col6a6Q8C6K9 AC131586.3-201ENSMUST00000228355 1367 ntBASIC15.08■□□□□ 0
Col6a6Q8C6K9 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col6a6Q8C6K9 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col6a6Q8C6K9 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Col6a6Q8C6K9 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col6a6Q8C6K9 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.08■□□□□ 0
Col6a6Q8C6K9 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Col6a6Q8C6K9 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC15.08■□□□□ 0
Col6a6Q8C6K9 Gm11779-201ENSMUST00000118541 368 ntBASIC15.08■□□□□ 0
Col6a6Q8C6K9 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC15.08■□□□□ 0
Col6a6Q8C6K9 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.08■□□□□ 0
Col6a6Q8C6K9 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.08■□□□□ 0
Col6a6Q8C6K9 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col6a6Q8C6K9 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.07■□□□□ 0
Col6a6Q8C6K9 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col6a6Q8C6K9 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.07■□□□□ 0
Col6a6Q8C6K9 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC15.07■□□□□ 0
Col6a6Q8C6K9 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col6a6Q8C6K9 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Col6a6Q8C6K9 AC123834.2-201ENSMUST00000224038 2340 ntBASIC15.07■□□□□ 0
Col6a6Q8C6K9 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.07■□□□□ 0
Col6a6Q8C6K9 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.07■□□□□ 0
Col6a6Q8C6K9 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Col6a6Q8C6K9 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col6a6Q8C6K9 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Col6a6Q8C6K9 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC15.07■□□□□ 0
Col6a6Q8C6K9 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15.07■□□□□ 0
Col6a6Q8C6K9 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.07■□□□□ 0
Col6a6Q8C6K9 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Col6a6Q8C6K9 Gm6736-201ENSMUST00000166583 948 ntBASIC15.07■□□□□ 0
Col6a6Q8C6K9 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.07■□□□□ 0
Col6a6Q8C6K9 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.07■□□□□ 0
Col6a6Q8C6K9 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
Col6a6Q8C6K9 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Col6a6Q8C6K9 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col6a6Q8C6K9 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.07■□□□□ 0
Col6a6Q8C6K9 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC15.07■□□□□ 0
Col6a6Q8C6K9 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col6a6Q8C6K9 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col6a6Q8C6K9 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col6a6Q8C6K9 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.06■□□□□ 0
Col6a6Q8C6K9 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.06■□□□□ 0
Col6a6Q8C6K9 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col6a6Q8C6K9 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col6a6Q8C6K9 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col6a6Q8C6K9 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.06■□□□□ 0
Col6a6Q8C6K9 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Col6a6Q8C6K9 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC15.06■□□□□ 0
Col6a6Q8C6K9 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col6a6Q8C6K9 Gm15165-201ENSMUST00000118140 502 ntBASIC15.06■□□□□ 0
Col6a6Q8C6K9 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.06■□□□□ 0
Col6a6Q8C6K9 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.06■□□□□ 0
Col6a6Q8C6K9 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Col6a6Q8C6K9 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Col6a6Q8C6K9 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col6a6Q8C6K9 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.06■□□□□ 0
Col6a6Q8C6K9 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col6a6Q8C6K9 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.06■□□□□ 0
Col6a6Q8C6K9 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Col6a6Q8C6K9 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col6a6Q8C6K9 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col6a6Q8C6K9 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Col6a6Q8C6K9 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Col6a6Q8C6K9 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Col6a6Q8C6K9 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.05■□□□□ 0
Col6a6Q8C6K9 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.05■□□□□ 0
Col6a6Q8C6K9 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Col6a6Q8C6K9 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Col6a6Q8C6K9 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Col6a6Q8C6K9 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Col6a6Q8C6K9 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col6a6Q8C6K9 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC15.05■□□□□ -0
Col6a6Q8C6K9 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.05■□□□□ -0
Col6a6Q8C6K9 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col6a6Q8C6K9 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Col6a6Q8C6K9 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.05■□□□□ -0
Col6a6Q8C6K9 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Col6a6Q8C6K9 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col6a6Q8C6K9 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col6a6Q8C6K9 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Col6a6Q8C6K9 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
Col6a6Q8C6K9 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Col6a6Q8C6K9 Gm4995-201ENSMUST00000117247 432 ntBASIC15.05■□□□□ -0
Col6a6Q8C6K9 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.05■□□□□ -0
Col6a6Q8C6K9 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.05■□□□□ -0
Col6a6Q8C6K9 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.05■□□□□ -0
Col6a6Q8C6K9 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col6a6Q8C6K9 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.05■□□□□ -0
Col6a6Q8C6K9 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
Col6a6Q8C6K9 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Col6a6Q8C6K9 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col6a6Q8C6K9 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC15.05■□□□□ -0
Col6a6Q8C6K9 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms