Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ccdc60Q8C4J0 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ccdc60Q8C4J0 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Ccdc60Q8C4J0 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ccdc60Q8C4J0 Gm21559-201ENSMUST00000220638 855 ntBASIC21.4■■□□□ 1.02
Ccdc60Q8C4J0 AC107711.5-202ENSMUST00000226429 702 ntBASIC21.4■■□□□ 1.02
Ccdc60Q8C4J0 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ccdc60Q8C4J0 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ccdc60Q8C4J0 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ccdc60Q8C4J0 Gm8587-201ENSMUST00000076538 843 ntBASIC21.4■■□□□ 1.02
Ccdc60Q8C4J0 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ccdc60Q8C4J0 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ccdc60Q8C4J0 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Ccdc60Q8C4J0 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ccdc60Q8C4J0 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ccdc60Q8C4J0 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ccdc60Q8C4J0 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
Ccdc60Q8C4J0 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC21.39■■□□□ 1.01
Ccdc60Q8C4J0 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ccdc60Q8C4J0 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ccdc60Q8C4J0 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ccdc60Q8C4J0 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ccdc60Q8C4J0 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ccdc60Q8C4J0 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC21.39■■□□□ 1.01
Ccdc60Q8C4J0 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ccdc60Q8C4J0 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Ccdc60Q8C4J0 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ccdc60Q8C4J0 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ccdc60Q8C4J0 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ccdc60Q8C4J0 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ccdc60Q8C4J0 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ccdc60Q8C4J0 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ccdc60Q8C4J0 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ccdc60Q8C4J0 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC21.38■■□□□ 1.01
Ccdc60Q8C4J0 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC21.38■■□□□ 1.01
Ccdc60Q8C4J0 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Ccdc60Q8C4J0 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Ccdc60Q8C4J0 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Ccdc60Q8C4J0 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Ccdc60Q8C4J0 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Ccdc60Q8C4J0 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ccdc60Q8C4J0 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Ccdc60Q8C4J0 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ccdc60Q8C4J0 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ccdc60Q8C4J0 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ccdc60Q8C4J0 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ccdc60Q8C4J0 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ccdc60Q8C4J0 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ccdc60Q8C4J0 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ccdc60Q8C4J0 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ccdc60Q8C4J0 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ccdc60Q8C4J0 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
Ccdc60Q8C4J0 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ccdc60Q8C4J0 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ccdc60Q8C4J0 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Ccdc60Q8C4J0 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ccdc60Q8C4J0 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC21.37■■□□□ 1.01
Ccdc60Q8C4J0 Gm27389-201ENSMUST00000183622 195 ntBASIC21.37■■□□□ 1.01
Ccdc60Q8C4J0 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC21.37■■□□□ 1.01
Ccdc60Q8C4J0 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Ccdc60Q8C4J0 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ccdc60Q8C4J0 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Ccdc60Q8C4J0 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Ccdc60Q8C4J0 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ccdc60Q8C4J0 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Ccdc60Q8C4J0 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ccdc60Q8C4J0 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ccdc60Q8C4J0 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ccdc60Q8C4J0 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ccdc60Q8C4J0 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ccdc60Q8C4J0 Gm36858-201ENSMUST00000194501 2391 ntBASIC21.37■■□□□ 1.01
Ccdc60Q8C4J0 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ccdc60Q8C4J0 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccdc60Q8C4J0 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccdc60Q8C4J0 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccdc60Q8C4J0 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccdc60Q8C4J0 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccdc60Q8C4J0 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Ccdc60Q8C4J0 Gm10013-201ENSMUST00000106074 672 ntBASIC21.36■■□□□ 1.01
Ccdc60Q8C4J0 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccdc60Q8C4J0 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ccdc60Q8C4J0 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccdc60Q8C4J0 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Ccdc60Q8C4J0 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccdc60Q8C4J0 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccdc60Q8C4J0 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccdc60Q8C4J0 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccdc60Q8C4J0 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Ccdc60Q8C4J0 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ccdc60Q8C4J0 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Ccdc60Q8C4J0 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
Ccdc60Q8C4J0 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ccdc60Q8C4J0 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ccdc60Q8C4J0 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC21.35■■□□□ 1.01
Ccdc60Q8C4J0 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC21.35■■□□□ 1.01
Ccdc60Q8C4J0 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ccdc60Q8C4J0 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ccdc60Q8C4J0 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Ccdc60Q8C4J0 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Ccdc60Q8C4J0 Shroom3-211ENSMUST00000225438 5742 ntBASIC21.35■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 102.1 ms