Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Smim4Q8C1Q6 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC14.06□□□□□ -0.16
Smim4Q8C1Q6 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC14.06□□□□□ -0.16
Smim4Q8C1Q6 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Smim4Q8C1Q6 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smim4Q8C1Q6 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smim4Q8C1Q6 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smim4Q8C1Q6 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smim4Q8C1Q6 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC14.06□□□□□ -0.16
Smim4Q8C1Q6 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.06□□□□□ -0.16
Smim4Q8C1Q6 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Smim4Q8C1Q6 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Smim4Q8C1Q6 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smim4Q8C1Q6 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Smim4Q8C1Q6 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smim4Q8C1Q6 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smim4Q8C1Q6 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.05□□□□□ -0.16
Smim4Q8C1Q6 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smim4Q8C1Q6 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Smim4Q8C1Q6 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smim4Q8C1Q6 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smim4Q8C1Q6 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Smim4Q8C1Q6 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smim4Q8C1Q6 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Smim4Q8C1Q6 Gm5643-201ENSMUST00000117081 966 ntBASIC14.05□□□□□ -0.16
Smim4Q8C1Q6 Gm12527-201ENSMUST00000117967 564 ntBASIC14.05□□□□□ -0.16
Smim4Q8C1Q6 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smim4Q8C1Q6 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC14.05□□□□□ -0.16
Smim4Q8C1Q6 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC14.05□□□□□ -0.16
Smim4Q8C1Q6 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smim4Q8C1Q6 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Smim4Q8C1Q6 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC14.05□□□□□ -0.16
Smim4Q8C1Q6 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smim4Q8C1Q6 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smim4Q8C1Q6 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smim4Q8C1Q6 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smim4Q8C1Q6 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Smim4Q8C1Q6 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Smim4Q8C1Q6 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smim4Q8C1Q6 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smim4Q8C1Q6 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smim4Q8C1Q6 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smim4Q8C1Q6 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smim4Q8C1Q6 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smim4Q8C1Q6 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smim4Q8C1Q6 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smim4Q8C1Q6 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Smim4Q8C1Q6 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smim4Q8C1Q6 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smim4Q8C1Q6 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Smim4Q8C1Q6 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smim4Q8C1Q6 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smim4Q8C1Q6 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Smim4Q8C1Q6 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC14.04□□□□□ -0.16
Smim4Q8C1Q6 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC14.04□□□□□ -0.16
Smim4Q8C1Q6 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smim4Q8C1Q6 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smim4Q8C1Q6 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smim4Q8C1Q6 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC14.04□□□□□ -0.16
Smim4Q8C1Q6 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smim4Q8C1Q6 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14.04□□□□□ -0.16
Smim4Q8C1Q6 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Smim4Q8C1Q6 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Smim4Q8C1Q6 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smim4Q8C1Q6 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Smim4Q8C1Q6 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smim4Q8C1Q6 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smim4Q8C1Q6 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smim4Q8C1Q6 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Smim4Q8C1Q6 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smim4Q8C1Q6 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.03□□□□□ -0.16
Smim4Q8C1Q6 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smim4Q8C1Q6 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smim4Q8C1Q6 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smim4Q8C1Q6 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Smim4Q8C1Q6 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smim4Q8C1Q6 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smim4Q8C1Q6 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smim4Q8C1Q6 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smim4Q8C1Q6 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smim4Q8C1Q6 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smim4Q8C1Q6 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smim4Q8C1Q6 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smim4Q8C1Q6 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smim4Q8C1Q6 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Smim4Q8C1Q6 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smim4Q8C1Q6 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Smim4Q8C1Q6 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smim4Q8C1Q6 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smim4Q8C1Q6 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smim4Q8C1Q6 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.03□□□□□ -0.16
Smim4Q8C1Q6 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Smim4Q8C1Q6 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smim4Q8C1Q6 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smim4Q8C1Q6 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smim4Q8C1Q6 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smim4Q8C1Q6 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smim4Q8C1Q6 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Smim4Q8C1Q6 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Smim4Q8C1Q6 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms