Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sh3rf3Q8C120 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sh3rf3Q8C120 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sh3rf3Q8C120 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sh3rf3Q8C120 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sh3rf3Q8C120 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sh3rf3Q8C120 Gm15565-201ENSMUST00000118890 427 ntBASIC17.47■□□□□ 0.39
Sh3rf3Q8C120 Mir6982-201ENSMUST00000184354 68 ntBASIC17.47■□□□□ 0.39
Sh3rf3Q8C120 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.47■□□□□ 0.39
Sh3rf3Q8C120 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sh3rf3Q8C120 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sh3rf3Q8C120 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sh3rf3Q8C120 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sh3rf3Q8C120 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sh3rf3Q8C120 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Sh3rf3Q8C120 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sh3rf3Q8C120 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sh3rf3Q8C120 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sh3rf3Q8C120 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sh3rf3Q8C120 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sh3rf3Q8C120 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sh3rf3Q8C120 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Sh3rf3Q8C120 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sh3rf3Q8C120 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sh3rf3Q8C120 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sh3rf3Q8C120 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sh3rf3Q8C120 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sh3rf3Q8C120 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.46■□□□□ 0.39
Sh3rf3Q8C120 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sh3rf3Q8C120 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sh3rf3Q8C120 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sh3rf3Q8C120 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.46■□□□□ 0.39
Sh3rf3Q8C120 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Sh3rf3Q8C120 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Sh3rf3Q8C120 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.38
Sh3rf3Q8C120 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.38
Sh3rf3Q8C120 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Sh3rf3Q8C120 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3rf3Q8C120 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3rf3Q8C120 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC17.45■□□□□ 0.38
Sh3rf3Q8C120 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3rf3Q8C120 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3rf3Q8C120 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3rf3Q8C120 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3rf3Q8C120 Gm13559-201ENSMUST00000120476 863 ntBASIC17.45■□□□□ 0.38
Sh3rf3Q8C120 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3rf3Q8C120 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.45■□□□□ 0.38
Sh3rf3Q8C120 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.45■□□□□ 0.38
Sh3rf3Q8C120 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Sh3rf3Q8C120 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3rf3Q8C120 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3rf3Q8C120 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.45■□□□□ 0.38
Sh3rf3Q8C120 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Sh3rf3Q8C120 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3rf3Q8C120 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3rf3Q8C120 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3rf3Q8C120 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Sh3rf3Q8C120 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3rf3Q8C120 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Sh3rf3Q8C120 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sh3rf3Q8C120 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3rf3Q8C120 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Sh3rf3Q8C120 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3rf3Q8C120 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3rf3Q8C120 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Sh3rf3Q8C120 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3rf3Q8C120 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3rf3Q8C120 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC17.44■□□□□ 0.38
Sh3rf3Q8C120 Gm43799-201ENSMUST00000201845 579 ntBASIC17.44■□□□□ 0.38
Sh3rf3Q8C120 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Sh3rf3Q8C120 Gm7370-201ENSMUST00000219471 767 ntBASIC17.44■□□□□ 0.38
Sh3rf3Q8C120 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Sh3rf3Q8C120 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.44■□□□□ 0.38
Sh3rf3Q8C120 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3rf3Q8C120 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.44■□□□□ 0.38
Sh3rf3Q8C120 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sh3rf3Q8C120 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Sh3rf3Q8C120 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sh3rf3Q8C120 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sh3rf3Q8C120 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.43■□□□□ 0.38
Sh3rf3Q8C120 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sh3rf3Q8C120 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sh3rf3Q8C120 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sh3rf3Q8C120 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.43■□□□□ 0.38
Sh3rf3Q8C120 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.43■□□□□ 0.38
Sh3rf3Q8C120 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
Sh3rf3Q8C120 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sh3rf3Q8C120 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sh3rf3Q8C120 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sh3rf3Q8C120 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Sh3rf3Q8C120 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.43■□□□□ 0.38
Sh3rf3Q8C120 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sh3rf3Q8C120 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.43■□□□□ 0.38
Sh3rf3Q8C120 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Sh3rf3Q8C120 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.42■□□□□ 0.38
Sh3rf3Q8C120 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Sh3rf3Q8C120 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sh3rf3Q8C120 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sh3rf3Q8C120 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sh3rf3Q8C120 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 95.9 ms