Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Sh3rf2Q8BZT2 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3rf2Q8BZT2 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.98■□□□□ 0.31
Sh3rf2Q8BZT2 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3rf2Q8BZT2 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3rf2Q8BZT2 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3rf2Q8BZT2 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3rf2Q8BZT2 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Sh3rf2Q8BZT2 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3rf2Q8BZT2 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.98■□□□□ 0.31
Sh3rf2Q8BZT2 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3rf2Q8BZT2 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Sh3rf2Q8BZT2 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3rf2Q8BZT2 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3rf2Q8BZT2 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3rf2Q8BZT2 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.98■□□□□ 0.31
Sh3rf2Q8BZT2 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3rf2Q8BZT2 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3rf2Q8BZT2 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3rf2Q8BZT2 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3rf2Q8BZT2 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3rf2Q8BZT2 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Sh3rf2Q8BZT2 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3rf2Q8BZT2 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3rf2Q8BZT2 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3rf2Q8BZT2 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
Sh3rf2Q8BZT2 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.97■□□□□ 0.31
Sh3rf2Q8BZT2 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3rf2Q8BZT2 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.97■□□□□ 0.31
Sh3rf2Q8BZT2 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3rf2Q8BZT2 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.96■□□□□ 0.31
Sh3rf2Q8BZT2 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3rf2Q8BZT2 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Sh3rf2Q8BZT2 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3rf2Q8BZT2 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3rf2Q8BZT2 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3rf2Q8BZT2 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.96■□□□□ 0.31
Sh3rf2Q8BZT2 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.96■□□□□ 0.31
Sh3rf2Q8BZT2 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3rf2Q8BZT2 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3rf2Q8BZT2 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3rf2Q8BZT2 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Sh3rf2Q8BZT2 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.96■□□□□ 0.31
Sh3rf2Q8BZT2 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.96■□□□□ 0.31
Sh3rf2Q8BZT2 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3rf2Q8BZT2 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3rf2Q8BZT2 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3rf2Q8BZT2 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3rf2Q8BZT2 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.96■□□□□ 0.31
Sh3rf2Q8BZT2 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3rf2Q8BZT2 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3rf2Q8BZT2 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3rf2Q8BZT2 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3rf2Q8BZT2 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3rf2Q8BZT2 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3rf2Q8BZT2 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Sh3rf2Q8BZT2 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Sh3rf2Q8BZT2 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
Sh3rf2Q8BZT2 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Sh3rf2Q8BZT2 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Sh3rf2Q8BZT2 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Sh3rf2Q8BZT2 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3rf2Q8BZT2 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3rf2Q8BZT2 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3rf2Q8BZT2 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3rf2Q8BZT2 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3rf2Q8BZT2 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.95■□□□□ 0.3
Sh3rf2Q8BZT2 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3rf2Q8BZT2 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Sh3rf2Q8BZT2 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Sh3rf2Q8BZT2 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.95■□□□□ 0.3
Sh3rf2Q8BZT2 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3rf2Q8BZT2 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3rf2Q8BZT2 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3rf2Q8BZT2 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
Sh3rf2Q8BZT2 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
Sh3rf2Q8BZT2 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3rf2Q8BZT2 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sh3rf2Q8BZT2 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sh3rf2Q8BZT2 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sh3rf2Q8BZT2 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
Sh3rf2Q8BZT2 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sh3rf2Q8BZT2 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.94■□□□□ 0.3
Sh3rf2Q8BZT2 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sh3rf2Q8BZT2 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.94■□□□□ 0.3
Sh3rf2Q8BZT2 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sh3rf2Q8BZT2 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sh3rf2Q8BZT2 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.94■□□□□ 0.3
Sh3rf2Q8BZT2 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sh3rf2Q8BZT2 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3rf2Q8BZT2 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.93■□□□□ 0.3
Sh3rf2Q8BZT2 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3rf2Q8BZT2 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3rf2Q8BZT2 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3rf2Q8BZT2 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3rf2Q8BZT2 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3rf2Q8BZT2 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3rf2Q8BZT2 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3rf2Q8BZT2 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sh3rf2Q8BZT2 Gm24589-201ENSMUST00000116692 94 ntBASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms