Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Chd9Q8BYH8 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chd9Q8BYH8 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.2□□□□□ -0.3
Chd9Q8BYH8 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chd9Q8BYH8 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chd9Q8BYH8 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Chd9Q8BYH8 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd9Q8BYH8 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Chd9Q8BYH8 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd9Q8BYH8 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Chd9Q8BYH8 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd9Q8BYH8 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.19□□□□□ -0.3
Chd9Q8BYH8 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd9Q8BYH8 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd9Q8BYH8 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd9Q8BYH8 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd9Q8BYH8 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Chd9Q8BYH8 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.19□□□□□ -0.3
Chd9Q8BYH8 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd9Q8BYH8 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd9Q8BYH8 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Chd9Q8BYH8 AC153794.1-201ENSMUST00000169148 126 ntBASIC13.19□□□□□ -0.3
Chd9Q8BYH8 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Chd9Q8BYH8 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd9Q8BYH8 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.19□□□□□ -0.3
Chd9Q8BYH8 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd9Q8BYH8 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd9Q8BYH8 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd9Q8BYH8 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd9Q8BYH8 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd9Q8BYH8 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd9Q8BYH8 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd9Q8BYH8 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Chd9Q8BYH8 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd9Q8BYH8 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Chd9Q8BYH8 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC13.18□□□□□ -0.3
Chd9Q8BYH8 Gm43433-201ENSMUST00000196573 481 ntBASIC13.18□□□□□ -0.3
Chd9Q8BYH8 Gm43630-201ENSMUST00000201550 776 ntBASIC13.18□□□□□ -0.3
Chd9Q8BYH8 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chd9Q8BYH8 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chd9Q8BYH8 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chd9Q8BYH8 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Chd9Q8BYH8 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC13.18□□□□□ -0.3
Chd9Q8BYH8 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Chd9Q8BYH8 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Chd9Q8BYH8 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Chd9Q8BYH8 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.18□□□□□ -0.3
Chd9Q8BYH8 Gm27628-201ENSMUST00000184911 107 ntBASIC13.18□□□□□ -0.3
Chd9Q8BYH8 Gm6007-201ENSMUST00000208170 823 ntBASIC13.18□□□□□ -0.3
Chd9Q8BYH8 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chd9Q8BYH8 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chd9Q8BYH8 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Chd9Q8BYH8 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chd9Q8BYH8 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chd9Q8BYH8 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Chd9Q8BYH8 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Chd9Q8BYH8 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Chd9Q8BYH8 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Chd9Q8BYH8 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Chd9Q8BYH8 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chd9Q8BYH8 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chd9Q8BYH8 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chd9Q8BYH8 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Chd9Q8BYH8 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC13.17□□□□□ -0.3
Chd9Q8BYH8 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chd9Q8BYH8 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chd9Q8BYH8 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chd9Q8BYH8 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Chd9Q8BYH8 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Chd9Q8BYH8 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chd9Q8BYH8 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chd9Q8BYH8 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chd9Q8BYH8 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Chd9Q8BYH8 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.17□□□□□ -0.3
Chd9Q8BYH8 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Chd9Q8BYH8 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Chd9Q8BYH8 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chd9Q8BYH8 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chd9Q8BYH8 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chd9Q8BYH8 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chd9Q8BYH8 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chd9Q8BYH8 Mir8117-201ENSMUST00000184773 107 ntBASIC13.16□□□□□ -0.3
Chd9Q8BYH8 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.16□□□□□ -0.3
Chd9Q8BYH8 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chd9Q8BYH8 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Chd9Q8BYH8 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Chd9Q8BYH8 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chd9Q8BYH8 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chd9Q8BYH8 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Chd9Q8BYH8 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chd9Q8BYH8 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC13.16□□□□□ -0.3
Chd9Q8BYH8 Dmtn-207ENSMUST00000228001 2437 ntBASIC13.16□□□□□ -0.3
Chd9Q8BYH8 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Chd9Q8BYH8 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chd9Q8BYH8 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC13.16□□□□□ -0.3
Chd9Q8BYH8 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Chd9Q8BYH8 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Chd9Q8BYH8 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chd9Q8BYH8 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Chd9Q8BYH8 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms