Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Gm24589-201ENSMUST00000116692 94 ntBASIC19.15■□□□□ 0.66
Scfd1Q8BRF7 Gm12895-201ENSMUST00000122214 226 ntBASIC19.15■□□□□ 0.66
Scfd1Q8BRF7 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Scfd1Q8BRF7 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC19.15■□□□□ 0.66
Scfd1Q8BRF7 AC153889.1-201ENSMUST00000219257 330 ntBASIC19.15■□□□□ 0.66
Scfd1Q8BRF7 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scfd1Q8BRF7 Gm11620-201ENSMUST00000118770 1845 ntBASIC19.15■□□□□ 0.66
Scfd1Q8BRF7 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC19.15■□□□□ 0.66
Scfd1Q8BRF7 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scfd1Q8BRF7 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Scfd1Q8BRF7 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Scfd1Q8BRF7 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Scfd1Q8BRF7 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Scfd1Q8BRF7 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scfd1Q8BRF7 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scfd1Q8BRF7 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scfd1Q8BRF7 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scfd1Q8BRF7 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scfd1Q8BRF7 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scfd1Q8BRF7 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Scfd1Q8BRF7 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Scfd1Q8BRF7 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Scfd1Q8BRF7 Gm34391-201ENSMUST00000203706 907 ntBASIC19.14■□□□□ 0.65
Scfd1Q8BRF7 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scfd1Q8BRF7 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scfd1Q8BRF7 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Scfd1Q8BRF7 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC19.14■□□□□ 0.65
Scfd1Q8BRF7 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scfd1Q8BRF7 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scfd1Q8BRF7 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Scfd1Q8BRF7 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scfd1Q8BRF7 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scfd1Q8BRF7 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scfd1Q8BRF7 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Scfd1Q8BRF7 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.14■□□□□ 0.65
Scfd1Q8BRF7 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Scfd1Q8BRF7 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scfd1Q8BRF7 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scfd1Q8BRF7 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Scfd1Q8BRF7 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Scfd1Q8BRF7 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Scfd1Q8BRF7 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC19.13■□□□□ 0.65
Scfd1Q8BRF7 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC19.13■□□□□ 0.65
Scfd1Q8BRF7 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC19.13■□□□□ 0.65
Scfd1Q8BRF7 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scfd1Q8BRF7 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Scfd1Q8BRF7 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.13■□□□□ 0.65
Scfd1Q8BRF7 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scfd1Q8BRF7 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scfd1Q8BRF7 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.13■□□□□ 0.65
Scfd1Q8BRF7 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Scfd1Q8BRF7 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scfd1Q8BRF7 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scfd1Q8BRF7 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Scfd1Q8BRF7 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Scfd1Q8BRF7 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scfd1Q8BRF7 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Scfd1Q8BRF7 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scfd1Q8BRF7 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scfd1Q8BRF7 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.12■□□□□ 0.65
Scfd1Q8BRF7 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scfd1Q8BRF7 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scfd1Q8BRF7 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC19.12■□□□□ 0.65
Scfd1Q8BRF7 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC19.12■□□□□ 0.65
Scfd1Q8BRF7 Gm10052-201ENSMUST00000168019 960 ntBASIC19.12■□□□□ 0.65
Scfd1Q8BRF7 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC19.12■□□□□ 0.65
Scfd1Q8BRF7 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC19.12■□□□□ 0.65
Scfd1Q8BRF7 Gm7729-201ENSMUST00000050143 801 ntBASIC19.12■□□□□ 0.65
Scfd1Q8BRF7 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scfd1Q8BRF7 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Scfd1Q8BRF7 Birc2-201ENSMUST00000054878 378 ntBASIC19.12■□□□□ 0.65
Scfd1Q8BRF7 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scfd1Q8BRF7 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Scfd1Q8BRF7 Rarb-207ENSMUST00000225921 2756 ntBASIC19.12■□□□□ 0.65
Scfd1Q8BRF7 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scfd1Q8BRF7 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Scfd1Q8BRF7 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scfd1Q8BRF7 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Scfd1Q8BRF7 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scfd1Q8BRF7 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Scfd1Q8BRF7 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Scfd1Q8BRF7 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scfd1Q8BRF7 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scfd1Q8BRF7 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Scfd1Q8BRF7 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC19.11■□□□□ 0.65
Scfd1Q8BRF7 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
Scfd1Q8BRF7 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Scfd1Q8BRF7 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scfd1Q8BRF7 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Scfd1Q8BRF7 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scfd1Q8BRF7 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scfd1Q8BRF7 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scfd1Q8BRF7 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Scfd1Q8BRF7 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scfd1Q8BRF7 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Scfd1Q8BRF7 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC19.1■□□□□ 0.65
Scfd1Q8BRF7 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC19.1■□□□□ 0.65
Scfd1Q8BRF7 Gm44430-201ENSMUST00000203376 995 ntBASIC19.1■□□□□ 0.65
Scfd1Q8BRF7 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC19.1■□□□□ 0.65
Scfd1Q8BRF7 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms