Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Cpsf4Q8BQZ5 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpsf4Q8BQZ5 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Cpsf4Q8BQZ5 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.3■□□□□ 0.2
Cpsf4Q8BQZ5 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cpsf4Q8BQZ5 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cpsf4Q8BQZ5 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cpsf4Q8BQZ5 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cpsf4Q8BQZ5 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.29■□□□□ 0.2
Cpsf4Q8BQZ5 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cpsf4Q8BQZ5 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cpsf4Q8BQZ5 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cpsf4Q8BQZ5 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Cpsf4Q8BQZ5 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Cpsf4Q8BQZ5 Gm38027-201ENSMUST00000192315 235 ntBASIC16.29■□□□□ 0.2
Cpsf4Q8BQZ5 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.29■□□□□ 0.2
Cpsf4Q8BQZ5 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Cpsf4Q8BQZ5 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.29■□□□□ 0.2
Cpsf4Q8BQZ5 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.29■□□□□ 0.2
Cpsf4Q8BQZ5 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cpsf4Q8BQZ5 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Cpsf4Q8BQZ5 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cpsf4Q8BQZ5 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cpsf4Q8BQZ5 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cpsf4Q8BQZ5 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.29■□□□□ 0.2
Cpsf4Q8BQZ5 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cpsf4Q8BQZ5 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cpsf4Q8BQZ5 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cpsf4Q8BQZ5 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Cpsf4Q8BQZ5 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cpsf4Q8BQZ5 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cpsf4Q8BQZ5 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cpsf4Q8BQZ5 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cpsf4Q8BQZ5 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cpsf4Q8BQZ5 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cpsf4Q8BQZ5 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cpsf4Q8BQZ5 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Cpsf4Q8BQZ5 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cpsf4Q8BQZ5 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cpsf4Q8BQZ5 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.28■□□□□ 0.2
Cpsf4Q8BQZ5 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Cpsf4Q8BQZ5 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Cpsf4Q8BQZ5 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.28■□□□□ 0.2
Cpsf4Q8BQZ5 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cpsf4Q8BQZ5 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cpsf4Q8BQZ5 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cpsf4Q8BQZ5 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cpsf4Q8BQZ5 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cpsf4Q8BQZ5 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cpsf4Q8BQZ5 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cpsf4Q8BQZ5 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Cpsf4Q8BQZ5 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cpsf4Q8BQZ5 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cpsf4Q8BQZ5 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cpsf4Q8BQZ5 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.27■□□□□ 0.2
Cpsf4Q8BQZ5 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cpsf4Q8BQZ5 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cpsf4Q8BQZ5 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cpsf4Q8BQZ5 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Cpsf4Q8BQZ5 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.27■□□□□ 0.2
Cpsf4Q8BQZ5 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Cpsf4Q8BQZ5 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Cpsf4Q8BQZ5 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Cpsf4Q8BQZ5 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cpsf4Q8BQZ5 Gm13559-201ENSMUST00000120476 863 ntBASIC16.27■□□□□ 0.2
Cpsf4Q8BQZ5 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Cpsf4Q8BQZ5 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.27■□□□□ 0.2
Cpsf4Q8BQZ5 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Cpsf4Q8BQZ5 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Cpsf4Q8BQZ5 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cpsf4Q8BQZ5 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.27■□□□□ 0.2
Cpsf4Q8BQZ5 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.27■□□□□ 0.2
Cpsf4Q8BQZ5 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Cpsf4Q8BQZ5 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Cpsf4Q8BQZ5 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cpsf4Q8BQZ5 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.27■□□□□ 0.19
Cpsf4Q8BQZ5 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cpsf4Q8BQZ5 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cpsf4Q8BQZ5 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
Cpsf4Q8BQZ5 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Cpsf4Q8BQZ5 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Cpsf4Q8BQZ5 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cpsf4Q8BQZ5 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Cpsf4Q8BQZ5 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cpsf4Q8BQZ5 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cpsf4Q8BQZ5 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
Cpsf4Q8BQZ5 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Cpsf4Q8BQZ5 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cpsf4Q8BQZ5 Gm24841-201ENSMUST00000158676 357 ntBASIC16.26■□□□□ 0.19
Cpsf4Q8BQZ5 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cpsf4Q8BQZ5 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cpsf4Q8BQZ5 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cpsf4Q8BQZ5 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cpsf4Q8BQZ5 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cpsf4Q8BQZ5 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cpsf4Q8BQZ5 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cpsf4Q8BQZ5 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.26■□□□□ 0.19
Cpsf4Q8BQZ5 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cpsf4Q8BQZ5 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cpsf4Q8BQZ5 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms