Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Rab11fip4Q8BQP8 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Rab11fip4Q8BQP8 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rab11fip4Q8BQP8 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.56■□□□□ 0.56
Rab11fip4Q8BQP8 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rab11fip4Q8BQP8 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rab11fip4Q8BQP8 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.56■□□□□ 0.56
Rab11fip4Q8BQP8 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rab11fip4Q8BQP8 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rab11fip4Q8BQP8 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rab11fip4Q8BQP8 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rab11fip4Q8BQP8 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rab11fip4Q8BQP8 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rab11fip4Q8BQP8 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.56■□□□□ 0.56
Rab11fip4Q8BQP8 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.56■□□□□ 0.56
Rab11fip4Q8BQP8 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rab11fip4Q8BQP8 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rab11fip4Q8BQP8 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rab11fip4Q8BQP8 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
Rab11fip4Q8BQP8 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Rab11fip4Q8BQP8 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Rab11fip4Q8BQP8 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rab11fip4Q8BQP8 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Rab11fip4Q8BQP8 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Rab11fip4Q8BQP8 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rab11fip4Q8BQP8 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Rab11fip4Q8BQP8 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.55■□□□□ 0.56
Rab11fip4Q8BQP8 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rab11fip4Q8BQP8 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Rab11fip4Q8BQP8 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rab11fip4Q8BQP8 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rab11fip4Q8BQP8 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rab11fip4Q8BQP8 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rab11fip4Q8BQP8 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Rab11fip4Q8BQP8 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rab11fip4Q8BQP8 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rab11fip4Q8BQP8 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rab11fip4Q8BQP8 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rab11fip4Q8BQP8 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rab11fip4Q8BQP8 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rab11fip4Q8BQP8 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Rab11fip4Q8BQP8 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rab11fip4Q8BQP8 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.55■□□□□ 0.56
Rab11fip4Q8BQP8 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Rab11fip4Q8BQP8 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rab11fip4Q8BQP8 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rab11fip4Q8BQP8 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rab11fip4Q8BQP8 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.55■□□□□ 0.56
Rab11fip4Q8BQP8 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rab11fip4Q8BQP8 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Rab11fip4Q8BQP8 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rab11fip4Q8BQP8 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rab11fip4Q8BQP8 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rab11fip4Q8BQP8 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.54■□□□□ 0.56
Rab11fip4Q8BQP8 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rab11fip4Q8BQP8 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rab11fip4Q8BQP8 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Rab11fip4Q8BQP8 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rab11fip4Q8BQP8 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Rab11fip4Q8BQP8 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rab11fip4Q8BQP8 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rab11fip4Q8BQP8 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rab11fip4Q8BQP8 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rab11fip4Q8BQP8 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rab11fip4Q8BQP8 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Rab11fip4Q8BQP8 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.53■□□□□ 0.56
Rab11fip4Q8BQP8 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rab11fip4Q8BQP8 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rab11fip4Q8BQP8 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Rab11fip4Q8BQP8 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rab11fip4Q8BQP8 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Rab11fip4Q8BQP8 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.53■□□□□ 0.56
Rab11fip4Q8BQP8 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.53■□□□□ 0.56
Rab11fip4Q8BQP8 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rab11fip4Q8BQP8 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rab11fip4Q8BQP8 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rab11fip4Q8BQP8 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rab11fip4Q8BQP8 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rab11fip4Q8BQP8 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.53■□□□□ 0.56
Rab11fip4Q8BQP8 Gm13474-201ENSMUST00000122466 815 ntBASIC18.53■□□□□ 0.56
Rab11fip4Q8BQP8 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.53■□□□□ 0.56
Rab11fip4Q8BQP8 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rab11fip4Q8BQP8 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.53■□□□□ 0.56
Rab11fip4Q8BQP8 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rab11fip4Q8BQP8 Gm7791-201ENSMUST00000219066 539 ntBASIC18.53■□□□□ 0.56
Rab11fip4Q8BQP8 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rab11fip4Q8BQP8 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rab11fip4Q8BQP8 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rab11fip4Q8BQP8 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rab11fip4Q8BQP8 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rab11fip4Q8BQP8 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rab11fip4Q8BQP8 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Rab11fip4Q8BQP8 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rab11fip4Q8BQP8 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rab11fip4Q8BQP8 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rab11fip4Q8BQP8 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rab11fip4Q8BQP8 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rab11fip4Q8BQP8 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Rab11fip4Q8BQP8 Gm45774-201ENSMUST00000211992 2665 ntBASIC18.53■□□□□ 0.56
Rab11fip4Q8BQP8 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms