Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Col16a1Q8BLX7 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Col16a1Q8BLX7 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Col16a1Q8BLX7 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Col16a1Q8BLX7 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Col16a1Q8BLX7 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Col16a1Q8BLX7 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Col16a1Q8BLX7 Gm37519-201ENSMUST00000191687 2210 ntBASIC21.97■■□□□ 1.11
Col16a1Q8BLX7 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Col16a1Q8BLX7 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Col16a1Q8BLX7 Gm11620-201ENSMUST00000118770 1845 ntBASIC21.97■■□□□ 1.11
Col16a1Q8BLX7 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Col16a1Q8BLX7 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Col16a1Q8BLX7 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Col16a1Q8BLX7 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC21.97■■□□□ 1.11
Col16a1Q8BLX7 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
Col16a1Q8BLX7 Gm7507-201ENSMUST00000183053 1008 ntBASIC21.97■■□□□ 1.11
Col16a1Q8BLX7 Gm43935-201ENSMUST00000203569 1050 ntBASIC21.97■■□□□ 1.11
Col16a1Q8BLX7 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Col16a1Q8BLX7 AC127349.1-201ENSMUST00000224590 266 ntBASIC21.97■■□□□ 1.11
Col16a1Q8BLX7 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Col16a1Q8BLX7 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Col16a1Q8BLX7 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Col16a1Q8BLX7 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC21.97■■□□□ 1.11
Col16a1Q8BLX7 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC21.97■■□□□ 1.11
Col16a1Q8BLX7 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Col16a1Q8BLX7 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Col16a1Q8BLX7 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC21.96■■□□□ 1.11
Col16a1Q8BLX7 Fcho2-208ENSMUST00000224992 2964 ntBASIC21.96■■□□□ 1.11
Col16a1Q8BLX7 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Col16a1Q8BLX7 AC131586.3-201ENSMUST00000228355 1367 ntBASIC21.96■■□□□ 1.11
Col16a1Q8BLX7 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Col16a1Q8BLX7 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC21.96■■□□□ 1.11
Col16a1Q8BLX7 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC21.96■■□□□ 1.11
Col16a1Q8BLX7 Gm12260-201ENSMUST00000122447 411 ntBASIC21.96■■□□□ 1.11
Col16a1Q8BLX7 Gm25911-201ENSMUST00000157621 56 ntBASIC21.96■■□□□ 1.11
Col16a1Q8BLX7 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Col16a1Q8BLX7 AV026068-213ENSMUST00000223675 1171 ntBASIC21.96■■□□□ 1.11
Col16a1Q8BLX7 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Col16a1Q8BLX7 Gm10175-201ENSMUST00000086013 645 ntBASIC21.96■■□□□ 1.11
Col16a1Q8BLX7 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Col16a1Q8BLX7 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Col16a1Q8BLX7 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Col16a1Q8BLX7 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Col16a1Q8BLX7 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Col16a1Q8BLX7 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Col16a1Q8BLX7 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Col16a1Q8BLX7 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Col16a1Q8BLX7 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Col16a1Q8BLX7 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
Col16a1Q8BLX7 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC21.96■■□□□ 1.11
Col16a1Q8BLX7 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC21.95■■□□□ 1.11
Col16a1Q8BLX7 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC21.95■■□□□ 1.11
Col16a1Q8BLX7 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.11
Col16a1Q8BLX7 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
Col16a1Q8BLX7 Gm15590-201ENSMUST00000078419 552 ntBASIC21.95■■□□□ 1.11
Col16a1Q8BLX7 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Col16a1Q8BLX7 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC21.95■■□□□ 1.1
Col16a1Q8BLX7 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC21.95■■□□□ 1.1
Col16a1Q8BLX7 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Col16a1Q8BLX7 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Col16a1Q8BLX7 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC21.95■■□□□ 1.1
Col16a1Q8BLX7 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC21.95■■□□□ 1.1
Col16a1Q8BLX7 Gm6550-201ENSMUST00000187574 993 ntBASIC21.95■■□□□ 1.1
Col16a1Q8BLX7 Gm37584-201ENSMUST00000193595 1290 ntBASIC21.95■■□□□ 1.1
Col16a1Q8BLX7 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC21.95■■□□□ 1.1
Col16a1Q8BLX7 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Col16a1Q8BLX7 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Col16a1Q8BLX7 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Col16a1Q8BLX7 Gm42939-201ENSMUST00000197514 2205 ntBASIC21.94■■□□□ 1.1
Col16a1Q8BLX7 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Col16a1Q8BLX7 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC21.94■■□□□ 1.1
Col16a1Q8BLX7 Gm9727-201ENSMUST00000161387 555 ntBASIC21.94■■□□□ 1.1
Col16a1Q8BLX7 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC21.94■■□□□ 1.1
Col16a1Q8BLX7 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC21.94■■□□□ 1.1
Col16a1Q8BLX7 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC21.94■■□□□ 1.1
Col16a1Q8BLX7 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC21.94■■□□□ 1.1
Col16a1Q8BLX7 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Col16a1Q8BLX7 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Col16a1Q8BLX7 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Col16a1Q8BLX7 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Col16a1Q8BLX7 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Col16a1Q8BLX7 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Col16a1Q8BLX7 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Col16a1Q8BLX7 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Col16a1Q8BLX7 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Col16a1Q8BLX7 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Col16a1Q8BLX7 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Col16a1Q8BLX7 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Col16a1Q8BLX7 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Col16a1Q8BLX7 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Col16a1Q8BLX7 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Col16a1Q8BLX7 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Col16a1Q8BLX7 AC225888.1-201ENSMUST00000227184 728 ntBASIC21.93■■□□□ 1.1
Col16a1Q8BLX7 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Col16a1Q8BLX7 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Col16a1Q8BLX7 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Col16a1Q8BLX7 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Col16a1Q8BLX7 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Col16a1Q8BLX7 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms