Protein–RNA interactions for Protein: Q8BKS9

Pum3, Pumilio homolog 3, mousemouse

Known RBP Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pum3Q8BKS9 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
Pum3Q8BKS9 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pum3Q8BKS9 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pum3Q8BKS9 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.76■□□□□ 0.43
Pum3Q8BKS9 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pum3Q8BKS9 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pum3Q8BKS9 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Pum3Q8BKS9 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pum3Q8BKS9 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pum3Q8BKS9 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pum3Q8BKS9 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pum3Q8BKS9 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pum3Q8BKS9 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pum3Q8BKS9 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pum3Q8BKS9 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pum3Q8BKS9 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pum3Q8BKS9 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pum3Q8BKS9 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Pum3Q8BKS9 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pum3Q8BKS9 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pum3Q8BKS9 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.75■□□□□ 0.43
Pum3Q8BKS9 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pum3Q8BKS9 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pum3Q8BKS9 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Pum3Q8BKS9 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.75■□□□□ 0.43
Pum3Q8BKS9 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
Pum3Q8BKS9 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pum3Q8BKS9 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pum3Q8BKS9 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pum3Q8BKS9 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Pum3Q8BKS9 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Pum3Q8BKS9 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pum3Q8BKS9 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pum3Q8BKS9 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pum3Q8BKS9 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.74■□□□□ 0.43
Pum3Q8BKS9 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pum3Q8BKS9 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pum3Q8BKS9 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pum3Q8BKS9 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pum3Q8BKS9 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Pum3Q8BKS9 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pum3Q8BKS9 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.74■□□□□ 0.43
Pum3Q8BKS9 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.74■□□□□ 0.43
Pum3Q8BKS9 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pum3Q8BKS9 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pum3Q8BKS9 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.74■□□□□ 0.43
Pum3Q8BKS9 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pum3Q8BKS9 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pum3Q8BKS9 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Pum3Q8BKS9 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Pum3Q8BKS9 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pum3Q8BKS9 Phf7-203ENSMUST00000226565 1971 ntBASIC17.73■□□□□ 0.43
Pum3Q8BKS9 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pum3Q8BKS9 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pum3Q8BKS9 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pum3Q8BKS9 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.73■□□□□ 0.43
Pum3Q8BKS9 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Pum3Q8BKS9 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Pum3Q8BKS9 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pum3Q8BKS9 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pum3Q8BKS9 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.73■□□□□ 0.43
Pum3Q8BKS9 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pum3Q8BKS9 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pum3Q8BKS9 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pum3Q8BKS9 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pum3Q8BKS9 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pum3Q8BKS9 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pum3Q8BKS9 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pum3Q8BKS9 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Pum3Q8BKS9 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pum3Q8BKS9 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pum3Q8BKS9 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pum3Q8BKS9 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pum3Q8BKS9 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Pum3Q8BKS9 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pum3Q8BKS9 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pum3Q8BKS9 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pum3Q8BKS9 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Pum3Q8BKS9 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pum3Q8BKS9 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Pum3Q8BKS9 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Pum3Q8BKS9 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pum3Q8BKS9 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pum3Q8BKS9 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pum3Q8BKS9 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Pum3Q8BKS9 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pum3Q8BKS9 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pum3Q8BKS9 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pum3Q8BKS9 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pum3Q8BKS9 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Pum3Q8BKS9 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.72■□□□□ 0.43
Pum3Q8BKS9 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pum3Q8BKS9 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pum3Q8BKS9 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pum3Q8BKS9 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pum3Q8BKS9 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.71■□□□□ 0.43
Pum3Q8BKS9 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Pum3Q8BKS9 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pum3Q8BKS9 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pum3Q8BKS9 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms