Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
Pcdh20Q8BIZ0 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
Pcdh20Q8BIZ0 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh20Q8BIZ0 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh20Q8BIZ0 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.39■□□□□ 0.21
Pcdh20Q8BIZ0 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh20Q8BIZ0 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh20Q8BIZ0 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh20Q8BIZ0 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh20Q8BIZ0 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh20Q8BIZ0 Gm13216-201ENSMUST00000117145 591 ntBASIC16.39■□□□□ 0.21
Pcdh20Q8BIZ0 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh20Q8BIZ0 Mir7071-201ENSMUST00000184847 69 ntBASIC16.39■□□□□ 0.21
Pcdh20Q8BIZ0 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh20Q8BIZ0 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh20Q8BIZ0 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh20Q8BIZ0 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh20Q8BIZ0 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Pcdh20Q8BIZ0 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh20Q8BIZ0 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh20Q8BIZ0 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Pcdh20Q8BIZ0 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh20Q8BIZ0 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh20Q8BIZ0 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.39■□□□□ 0.21
Pcdh20Q8BIZ0 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh20Q8BIZ0 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh20Q8BIZ0 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh20Q8BIZ0 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pcdh20Q8BIZ0 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh20Q8BIZ0 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh20Q8BIZ0 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh20Q8BIZ0 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh20Q8BIZ0 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.38■□□□□ 0.21
Pcdh20Q8BIZ0 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh20Q8BIZ0 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh20Q8BIZ0 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh20Q8BIZ0 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh20Q8BIZ0 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh20Q8BIZ0 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.38■□□□□ 0.21
Pcdh20Q8BIZ0 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.38■□□□□ 0.21
Pcdh20Q8BIZ0 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh20Q8BIZ0 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh20Q8BIZ0 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh20Q8BIZ0 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh20Q8BIZ0 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Pcdh20Q8BIZ0 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh20Q8BIZ0 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh20Q8BIZ0 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh20Q8BIZ0 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pcdh20Q8BIZ0 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh20Q8BIZ0 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.37■□□□□ 0.21
Pcdh20Q8BIZ0 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.37■□□□□ 0.21
Pcdh20Q8BIZ0 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.37■□□□□ 0.21
Pcdh20Q8BIZ0 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh20Q8BIZ0 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh20Q8BIZ0 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh20Q8BIZ0 Gm5417-201ENSMUST00000079706 384 ntBASIC16.37■□□□□ 0.21
Pcdh20Q8BIZ0 Dancr-204ENSMUST00000132389 2347 ntBASIC16.37■□□□□ 0.21
Pcdh20Q8BIZ0 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh20Q8BIZ0 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh20Q8BIZ0 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.37■□□□□ 0.21
Pcdh20Q8BIZ0 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.37■□□□□ 0.21
Pcdh20Q8BIZ0 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh20Q8BIZ0 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Pcdh20Q8BIZ0 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh20Q8BIZ0 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh20Q8BIZ0 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh20Q8BIZ0 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh20Q8BIZ0 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh20Q8BIZ0 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh20Q8BIZ0 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh20Q8BIZ0 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh20Q8BIZ0 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pcdh20Q8BIZ0 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh20Q8BIZ0 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Pcdh20Q8BIZ0 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Pcdh20Q8BIZ0 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh20Q8BIZ0 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh20Q8BIZ0 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh20Q8BIZ0 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh20Q8BIZ0 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.36■□□□□ 0.21
Pcdh20Q8BIZ0 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh20Q8BIZ0 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh20Q8BIZ0 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh20Q8BIZ0 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh20Q8BIZ0 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Pcdh20Q8BIZ0 Gm10517-202ENSMUST00000192970 758 ntBASIC16.36■□□□□ 0.21
Pcdh20Q8BIZ0 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh20Q8BIZ0 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh20Q8BIZ0 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh20Q8BIZ0 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Pcdh20Q8BIZ0 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh20Q8BIZ0 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh20Q8BIZ0 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh20Q8BIZ0 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh20Q8BIZ0 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh20Q8BIZ0 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.35■□□□□ 0.21
Pcdh20Q8BIZ0 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh20Q8BIZ0 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh20Q8BIZ0 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms