Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Gm29791-202ENSMUST00000207888 369 ntBASIC16■□□□□ 0.15
SynbQ8BI41 Gm7213-201ENSMUST00000215977 950 ntBASIC16■□□□□ 0.15
SynbQ8BI41 Gm9867-201ENSMUST00000192212 2647 ntBASIC16■□□□□ 0.15
SynbQ8BI41 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SynbQ8BI41 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16■□□□□ 0.15
SynbQ8BI41 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SynbQ8BI41 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SynbQ8BI41 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
SynbQ8BI41 Gm37820-201ENSMUST00000194021 2147 ntBASIC16■□□□□ 0.15
SynbQ8BI41 Gm37812-201ENSMUST00000195216 2475 ntBASIC16■□□□□ 0.15
SynbQ8BI41 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
SynbQ8BI41 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
SynbQ8BI41 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SynbQ8BI41 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
SynbQ8BI41 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SynbQ8BI41 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SynbQ8BI41 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SynbQ8BI41 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SynbQ8BI41 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SynbQ8BI41 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SynbQ8BI41 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SynbQ8BI41 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SynbQ8BI41 Gm17807-201ENSMUST00000186869 298 ntBASIC15.99■□□□□ 0.15
SynbQ8BI41 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
SynbQ8BI41 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SynbQ8BI41 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SynbQ8BI41 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SynbQ8BI41 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SynbQ8BI41 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SynbQ8BI41 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SynbQ8BI41 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SynbQ8BI41 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SynbQ8BI41 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.98■□□□□ 0.15
SynbQ8BI41 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SynbQ8BI41 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SynbQ8BI41 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SynbQ8BI41 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.98■□□□□ 0.15
SynbQ8BI41 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.98■□□□□ 0.15
SynbQ8BI41 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SynbQ8BI41 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SynbQ8BI41 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SynbQ8BI41 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SynbQ8BI41 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SynbQ8BI41 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SynbQ8BI41 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
SynbQ8BI41 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SynbQ8BI41 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SynbQ8BI41 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
SynbQ8BI41 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SynbQ8BI41 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
SynbQ8BI41 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SynbQ8BI41 Gm11355-201ENSMUST00000121120 306 ntBASIC15.97■□□□□ 0.15
SynbQ8BI41 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.97■□□□□ 0.15
SynbQ8BI41 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SynbQ8BI41 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SynbQ8BI41 Gm28033-201ENSMUST00000184224 96 ntBASIC15.97■□□□□ 0.15
SynbQ8BI41 Gm17808-201ENSMUST00000200859 894 ntBASIC15.97■□□□□ 0.15
SynbQ8BI41 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SynbQ8BI41 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SynbQ8BI41 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SynbQ8BI41 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SynbQ8BI41 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
SynbQ8BI41 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SynbQ8BI41 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SynbQ8BI41 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SynbQ8BI41 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.96■□□□□ 0.15
SynbQ8BI41 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SynbQ8BI41 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SynbQ8BI41 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SynbQ8BI41 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SynbQ8BI41 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
SynbQ8BI41 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SynbQ8BI41 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
SynbQ8BI41 Gm18669-201ENSMUST00000216049 778 ntBASIC15.96■□□□□ 0.15
SynbQ8BI41 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.96■□□□□ 0.15
SynbQ8BI41 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
SynbQ8BI41 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
SynbQ8BI41 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SynbQ8BI41 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SynbQ8BI41 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SynbQ8BI41 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
SynbQ8BI41 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
SynbQ8BI41 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
SynbQ8BI41 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.14
SynbQ8BI41 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SynbQ8BI41 Tgds-204ENSMUST00000228543 1594 ntBASIC15.96■□□□□ 0.14
SynbQ8BI41 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SynbQ8BI41 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SynbQ8BI41 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
SynbQ8BI41 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SynbQ8BI41 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SynbQ8BI41 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SynbQ8BI41 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SynbQ8BI41 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SynbQ8BI41 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SynbQ8BI41 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SynbQ8BI41 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.95■□□□□ 0.14
SynbQ8BI41 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SynbQ8BI41 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SynbQ8BI41 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms