Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.74■□□□□ 0.11
Clrn3Q8BHH8 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Clrn3Q8BHH8 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Clrn3Q8BHH8 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Clrn3Q8BHH8 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Clrn3Q8BHH8 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Clrn3Q8BHH8 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Clrn3Q8BHH8 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Clrn3Q8BHH8 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Clrn3Q8BHH8 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
Clrn3Q8BHH8 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Clrn3Q8BHH8 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC15.73■□□□□ 0.11
Clrn3Q8BHH8 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Clrn3Q8BHH8 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Clrn3Q8BHH8 AC135963.1-201ENSMUST00000211640 717 ntBASIC15.73■□□□□ 0.11
Clrn3Q8BHH8 AC120002.2-201ENSMUST00000220205 773 ntBASIC15.73■□□□□ 0.11
Clrn3Q8BHH8 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Clrn3Q8BHH8 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Clrn3Q8BHH8 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Clrn3Q8BHH8 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Clrn3Q8BHH8 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.73■□□□□ 0.11
Clrn3Q8BHH8 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Clrn3Q8BHH8 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
Clrn3Q8BHH8 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
Clrn3Q8BHH8 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Clrn3Q8BHH8 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clrn3Q8BHH8 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clrn3Q8BHH8 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Clrn3Q8BHH8 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.72■□□□□ 0.11
Clrn3Q8BHH8 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.72■□□□□ 0.11
Clrn3Q8BHH8 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Clrn3Q8BHH8 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Clrn3Q8BHH8 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clrn3Q8BHH8 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Clrn3Q8BHH8 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC15.72■□□□□ 0.11
Clrn3Q8BHH8 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clrn3Q8BHH8 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clrn3Q8BHH8 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC15.72■□□□□ 0.11
Clrn3Q8BHH8 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Clrn3Q8BHH8 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clrn3Q8BHH8 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clrn3Q8BHH8 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clrn3Q8BHH8 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.72■□□□□ 0.11
Clrn3Q8BHH8 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clrn3Q8BHH8 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clrn3Q8BHH8 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clrn3Q8BHH8 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clrn3Q8BHH8 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Clrn3Q8BHH8 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
Clrn3Q8BHH8 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Clrn3Q8BHH8 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clrn3Q8BHH8 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clrn3Q8BHH8 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clrn3Q8BHH8 Gm37519-201ENSMUST00000191687 2210 ntBASIC15.71■□□□□ 0.11
Clrn3Q8BHH8 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Clrn3Q8BHH8 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clrn3Q8BHH8 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clrn3Q8BHH8 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clrn3Q8BHH8 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Clrn3Q8BHH8 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
Clrn3Q8BHH8 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clrn3Q8BHH8 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Clrn3Q8BHH8 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Clrn3Q8BHH8 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clrn3Q8BHH8 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Clrn3Q8BHH8 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Clrn3Q8BHH8 Gm37055-201ENSMUST00000191866 133 ntBASIC15.71■□□□□ 0.11
Clrn3Q8BHH8 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC15.71■□□□□ 0.11
Clrn3Q8BHH8 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clrn3Q8BHH8 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clrn3Q8BHH8 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clrn3Q8BHH8 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clrn3Q8BHH8 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clrn3Q8BHH8 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Clrn3Q8BHH8 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clrn3Q8BHH8 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clrn3Q8BHH8 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.71■□□□□ 0.11
Clrn3Q8BHH8 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.71■□□□□ 0.11
Clrn3Q8BHH8 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clrn3Q8BHH8 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Clrn3Q8BHH8 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Clrn3Q8BHH8 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Clrn3Q8BHH8 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Clrn3Q8BHH8 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Clrn3Q8BHH8 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Clrn3Q8BHH8 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clrn3Q8BHH8 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Clrn3Q8BHH8 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clrn3Q8BHH8 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC15.7■□□□□ 0.1
Clrn3Q8BHH8 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clrn3Q8BHH8 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clrn3Q8BHH8 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clrn3Q8BHH8 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC15.7■□□□□ 0.1
Clrn3Q8BHH8 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC15.7■□□□□ 0.1
Clrn3Q8BHH8 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC15.7■□□□□ 0.1
Clrn3Q8BHH8 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC15.7■□□□□ 0.1
Clrn3Q8BHH8 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC15.7■□□□□ 0.1
Clrn3Q8BHH8 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clrn3Q8BHH8 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Clrn3Q8BHH8 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms