Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim6Q8BGE7 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Trim6Q8BGE7 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim6Q8BGE7 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim6Q8BGE7 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC17.85■□□□□ 0.45
Trim6Q8BGE7 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trim6Q8BGE7 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim6Q8BGE7 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trim6Q8BGE7 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim6Q8BGE7 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim6Q8BGE7 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.84■□□□□ 0.45
Trim6Q8BGE7 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim6Q8BGE7 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.84■□□□□ 0.45
Trim6Q8BGE7 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim6Q8BGE7 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim6Q8BGE7 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Trim6Q8BGE7 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim6Q8BGE7 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim6Q8BGE7 Dio3-201ENSMUST00000097228 1449 ntBASIC17.84■□□□□ 0.45
Trim6Q8BGE7 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim6Q8BGE7 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim6Q8BGE7 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim6Q8BGE7 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.84■□□□□ 0.45
Trim6Q8BGE7 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.84■□□□□ 0.45
Trim6Q8BGE7 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.84■□□□□ 0.45
Trim6Q8BGE7 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.84■□□□□ 0.45
Trim6Q8BGE7 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim6Q8BGE7 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim6Q8BGE7 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim6Q8BGE7 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
Trim6Q8BGE7 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trim6Q8BGE7 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trim6Q8BGE7 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Trim6Q8BGE7 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim6Q8BGE7 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim6Q8BGE7 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim6Q8BGE7 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.83■□□□□ 0.45
Trim6Q8BGE7 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Trim6Q8BGE7 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Trim6Q8BGE7 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim6Q8BGE7 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim6Q8BGE7 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Trim6Q8BGE7 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trim6Q8BGE7 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.83■□□□□ 0.44
Trim6Q8BGE7 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.83■□□□□ 0.44
Trim6Q8BGE7 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Trim6Q8BGE7 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim6Q8BGE7 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim6Q8BGE7 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim6Q8BGE7 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim6Q8BGE7 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Trim6Q8BGE7 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Trim6Q8BGE7 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Trim6Q8BGE7 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim6Q8BGE7 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Trim6Q8BGE7 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim6Q8BGE7 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Trim6Q8BGE7 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim6Q8BGE7 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.82■□□□□ 0.44
Trim6Q8BGE7 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim6Q8BGE7 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim6Q8BGE7 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim6Q8BGE7 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim6Q8BGE7 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim6Q8BGE7 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Trim6Q8BGE7 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim6Q8BGE7 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim6Q8BGE7 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim6Q8BGE7 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim6Q8BGE7 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim6Q8BGE7 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim6Q8BGE7 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim6Q8BGE7 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim6Q8BGE7 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim6Q8BGE7 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim6Q8BGE7 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Trim6Q8BGE7 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trim6Q8BGE7 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trim6Q8BGE7 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim6Q8BGE7 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.81■□□□□ 0.44
Trim6Q8BGE7 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Trim6Q8BGE7 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim6Q8BGE7 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.81■□□□□ 0.44
Trim6Q8BGE7 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim6Q8BGE7 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim6Q8BGE7 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Trim6Q8BGE7 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Trim6Q8BGE7 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trim6Q8BGE7 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trim6Q8BGE7 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
Trim6Q8BGE7 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim6Q8BGE7 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
Trim6Q8BGE7 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim6Q8BGE7 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Trim6Q8BGE7 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim6Q8BGE7 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim6Q8BGE7 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim6Q8BGE7 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Trim6Q8BGE7 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim6Q8BGE7 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms