Protein–RNA interactions for Protein: Q811I0

Atpaf1, ATP synthase mitochondrial F1 complex assembly factor 1, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atpaf1Q811I0 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Atpaf1Q811I0 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Atpaf1Q811I0 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Atpaf1Q811I0 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Atpaf1Q811I0 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Atpaf1Q811I0 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Atpaf1Q811I0 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Atpaf1Q811I0 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Atpaf1Q811I0 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Atpaf1Q811I0 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Atpaf1Q811I0 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Atpaf1Q811I0 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Atpaf1Q811I0 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Atpaf1Q811I0 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Atpaf1Q811I0 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Atpaf1Q811I0 Gm19721-201ENSMUST00000195284 1764 ntBASIC13.76□□□□□ -0.21
Atpaf1Q811I0 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
Atpaf1Q811I0 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Atpaf1Q811I0 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Atpaf1Q811I0 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
Atpaf1Q811I0 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Atpaf1Q811I0 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Atpaf1Q811I0 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Atpaf1Q811I0 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Atpaf1Q811I0 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Atpaf1Q811I0 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Atpaf1Q811I0 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Atpaf1Q811I0 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.75□□□□□ -0.21
Atpaf1Q811I0 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Atpaf1Q811I0 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Atpaf1Q811I0 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Atpaf1Q811I0 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Atpaf1Q811I0 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Atpaf1Q811I0 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Atpaf1Q811I0 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Atpaf1Q811I0 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Atpaf1Q811I0 Gm12821-201ENSMUST00000120022 600 ntBASIC13.75□□□□□ -0.21
Atpaf1Q811I0 Gm26833-201ENSMUST00000180899 440 ntBASIC13.75□□□□□ -0.21
Atpaf1Q811I0 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Atpaf1Q811I0 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Atpaf1Q811I0 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Atpaf1Q811I0 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Atpaf1Q811I0 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Atpaf1Q811I0 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Atpaf1Q811I0 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Atpaf1Q811I0 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Atpaf1Q811I0 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Atpaf1Q811I0 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Atpaf1Q811I0 Asic1-205ENSMUST00000228185 1818 ntBASIC13.75□□□□□ -0.21
Atpaf1Q811I0 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Atpaf1Q811I0 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Atpaf1Q811I0 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Atpaf1Q811I0 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Atpaf1Q811I0 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Atpaf1Q811I0 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Atpaf1Q811I0 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Atpaf1Q811I0 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.75□□□□□ -0.21
Atpaf1Q811I0 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Atpaf1Q811I0 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Atpaf1Q811I0 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC13.74□□□□□ -0.21
Atpaf1Q811I0 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Atpaf1Q811I0 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Atpaf1Q811I0 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Atpaf1Q811I0 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Atpaf1Q811I0 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Atpaf1Q811I0 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Atpaf1Q811I0 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Atpaf1Q811I0 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Atpaf1Q811I0 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Atpaf1Q811I0 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC13.74□□□□□ -0.21
Atpaf1Q811I0 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Atpaf1Q811I0 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Atpaf1Q811I0 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Atpaf1Q811I0 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Atpaf1Q811I0 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Atpaf1Q811I0 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Atpaf1Q811I0 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Atpaf1Q811I0 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Atpaf1Q811I0 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Atpaf1Q811I0 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Atpaf1Q811I0 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Atpaf1Q811I0 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Atpaf1Q811I0 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Atpaf1Q811I0 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Atpaf1Q811I0 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Atpaf1Q811I0 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Atpaf1Q811I0 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Atpaf1Q811I0 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Atpaf1Q811I0 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.73□□□□□ -0.21
Atpaf1Q811I0 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Atpaf1Q811I0 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Atpaf1Q811I0 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Atpaf1Q811I0 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Atpaf1Q811I0 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Atpaf1Q811I0 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Atpaf1Q811I0 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Atpaf1Q811I0 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Atpaf1Q811I0 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Atpaf1Q811I0 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Atpaf1Q811I0 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms