Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sh3tc2Q80VA5 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Sh3tc2Q80VA5 Gm12895-201ENSMUST00000122214 226 ntBASIC18.23■□□□□ 0.51
Sh3tc2Q80VA5 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sh3tc2Q80VA5 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sh3tc2Q80VA5 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sh3tc2Q80VA5 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sh3tc2Q80VA5 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sh3tc2Q80VA5 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sh3tc2Q80VA5 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Sh3tc2Q80VA5 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Sh3tc2Q80VA5 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3tc2Q80VA5 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3tc2Q80VA5 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3tc2Q80VA5 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC18.22■□□□□ 0.51
Sh3tc2Q80VA5 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3tc2Q80VA5 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3tc2Q80VA5 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3tc2Q80VA5 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3tc2Q80VA5 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3tc2Q80VA5 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Sh3tc2Q80VA5 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3tc2Q80VA5 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3tc2Q80VA5 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3tc2Q80VA5 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3tc2Q80VA5 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC18.22■□□□□ 0.51
Sh3tc2Q80VA5 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3tc2Q80VA5 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3tc2Q80VA5 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3tc2Q80VA5 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3tc2Q80VA5 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3tc2Q80VA5 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3tc2Q80VA5 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3tc2Q80VA5 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Sh3tc2Q80VA5 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sh3tc2Q80VA5 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sh3tc2Q80VA5 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sh3tc2Q80VA5 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sh3tc2Q80VA5 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Sh3tc2Q80VA5 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC18.21■□□□□ 0.51
Sh3tc2Q80VA5 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC18.21■□□□□ 0.51
Sh3tc2Q80VA5 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Sh3tc2Q80VA5 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sh3tc2Q80VA5 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sh3tc2Q80VA5 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sh3tc2Q80VA5 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sh3tc2Q80VA5 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Sh3tc2Q80VA5 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sh3tc2Q80VA5 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sh3tc2Q80VA5 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sh3tc2Q80VA5 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sh3tc2Q80VA5 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sh3tc2Q80VA5 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Sh3tc2Q80VA5 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sh3tc2Q80VA5 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sh3tc2Q80VA5 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC18.2■□□□□ 0.5
Sh3tc2Q80VA5 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sh3tc2Q80VA5 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Sh3tc2Q80VA5 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC18.2■□□□□ 0.5
Sh3tc2Q80VA5 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC18.2■□□□□ 0.5
Sh3tc2Q80VA5 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC18.2■□□□□ 0.5
Sh3tc2Q80VA5 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC18.2■□□□□ 0.5
Sh3tc2Q80VA5 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Sh3tc2Q80VA5 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sh3tc2Q80VA5 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sh3tc2Q80VA5 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sh3tc2Q80VA5 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sh3tc2Q80VA5 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.2■□□□□ 0.5
Sh3tc2Q80VA5 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sh3tc2Q80VA5 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.2■□□□□ 0.5
Sh3tc2Q80VA5 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sh3tc2Q80VA5 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sh3tc2Q80VA5 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sh3tc2Q80VA5 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sh3tc2Q80VA5 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sh3tc2Q80VA5 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.19■□□□□ 0.5
Sh3tc2Q80VA5 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sh3tc2Q80VA5 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sh3tc2Q80VA5 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.19■□□□□ 0.5
Sh3tc2Q80VA5 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.19■□□□□ 0.5
Sh3tc2Q80VA5 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC18.19■□□□□ 0.5
Sh3tc2Q80VA5 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sh3tc2Q80VA5 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.19■□□□□ 0.5
Sh3tc2Q80VA5 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sh3tc2Q80VA5 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sh3tc2Q80VA5 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Sh3tc2Q80VA5 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh3tc2Q80VA5 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sh3tc2Q80VA5 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sh3tc2Q80VA5 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh3tc2Q80VA5 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh3tc2Q80VA5 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh3tc2Q80VA5 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sh3tc2Q80VA5 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh3tc2Q80VA5 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Sh3tc2Q80VA5 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh3tc2Q80VA5 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Sh3tc2Q80VA5 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Sh3tc2Q80VA5 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sh3tc2Q80VA5 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms