Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Rpp38Q80UU2 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.74■□□□□ 0.27
Rpp38Q80UU2 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpp38Q80UU2 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rpp38Q80UU2 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rpp38Q80UU2 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpp38Q80UU2 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpp38Q80UU2 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Rpp38Q80UU2 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpp38Q80UU2 Gm9987-201ENSMUST00000069768 567 ntBASIC16.74■□□□□ 0.27
Rpp38Q80UU2 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpp38Q80UU2 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpp38Q80UU2 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpp38Q80UU2 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpp38Q80UU2 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpp38Q80UU2 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Rpp38Q80UU2 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
Rpp38Q80UU2 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rpp38Q80UU2 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpp38Q80UU2 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpp38Q80UU2 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpp38Q80UU2 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rpp38Q80UU2 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
Rpp38Q80UU2 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.73■□□□□ 0.27
Rpp38Q80UU2 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpp38Q80UU2 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Rpp38Q80UU2 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpp38Q80UU2 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpp38Q80UU2 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Rpp38Q80UU2 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.73■□□□□ 0.27
Rpp38Q80UU2 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Rpp38Q80UU2 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rpp38Q80UU2 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpp38Q80UU2 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpp38Q80UU2 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Rpp38Q80UU2 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.73■□□□□ 0.27
Rpp38Q80UU2 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rpp38Q80UU2 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Rpp38Q80UU2 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Rpp38Q80UU2 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpp38Q80UU2 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Rpp38Q80UU2 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpp38Q80UU2 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
Rpp38Q80UU2 Gm11336-201ENSMUST00000118168 334 ntBASIC16.72■□□□□ 0.27
Rpp38Q80UU2 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.72■□□□□ 0.27
Rpp38Q80UU2 Gm18032-201ENSMUST00000222541 538 ntBASIC16.72■□□□□ 0.27
Rpp38Q80UU2 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpp38Q80UU2 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
Rpp38Q80UU2 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpp38Q80UU2 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpp38Q80UU2 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpp38Q80UU2 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpp38Q80UU2 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rpp38Q80UU2 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpp38Q80UU2 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rpp38Q80UU2 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rpp38Q80UU2 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rpp38Q80UU2 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rpp38Q80UU2 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.71■□□□□ 0.27
Rpp38Q80UU2 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rpp38Q80UU2 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Rpp38Q80UU2 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rpp38Q80UU2 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rpp38Q80UU2 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rpp38Q80UU2 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rpp38Q80UU2 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rpp38Q80UU2 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Rpp38Q80UU2 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rpp38Q80UU2 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rpp38Q80UU2 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rpp38Q80UU2 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rpp38Q80UU2 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rpp38Q80UU2 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rpp38Q80UU2 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.71■□□□□ 0.26
Rpp38Q80UU2 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.71■□□□□ 0.26
Rpp38Q80UU2 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rpp38Q80UU2 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.7■□□□□ 0.26
Rpp38Q80UU2 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Rpp38Q80UU2 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Rpp38Q80UU2 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpp38Q80UU2 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpp38Q80UU2 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpp38Q80UU2 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.7■□□□□ 0.26
Rpp38Q80UU2 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rpp38Q80UU2 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rpp38Q80UU2 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpp38Q80UU2 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rpp38Q80UU2 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpp38Q80UU2 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpp38Q80UU2 Gm21559-201ENSMUST00000220638 855 ntBASIC16.7■□□□□ 0.26
Rpp38Q80UU2 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpp38Q80UU2 Gm8587-201ENSMUST00000076538 843 ntBASIC16.7■□□□□ 0.26
Rpp38Q80UU2 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Rpp38Q80UU2 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpp38Q80UU2 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rpp38Q80UU2 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Rpp38Q80UU2 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpp38Q80UU2 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpp38Q80UU2 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rpp38Q80UU2 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms