Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp8Q80U87 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Usp8Q80U87 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp8Q80U87 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Usp8Q80U87 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Usp8Q80U87 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Usp8Q80U87 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Usp8Q80U87 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Usp8Q80U87 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Usp8Q80U87 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp8Q80U87 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp8Q80U87 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.83■□□□□ 0.28
Usp8Q80U87 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC16.83■□□□□ 0.28
Usp8Q80U87 Gm10698-201ENSMUST00000182663 604 ntBASIC16.83■□□□□ 0.28
Usp8Q80U87 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Usp8Q80U87 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.83■□□□□ 0.28
Usp8Q80U87 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Usp8Q80U87 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Usp8Q80U87 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC16.83■□□□□ 0.28
Usp8Q80U87 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.83■□□□□ 0.28
Usp8Q80U87 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Usp8Q80U87 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Usp8Q80U87 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.82■□□□□ 0.28
Usp8Q80U87 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp8Q80U87 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp8Q80U87 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp8Q80U87 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp8Q80U87 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp8Q80U87 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.82■□□□□ 0.28
Usp8Q80U87 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp8Q80U87 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp8Q80U87 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp8Q80U87 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp8Q80U87 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Usp8Q80U87 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Usp8Q80U87 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Usp8Q80U87 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp8Q80U87 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.82■□□□□ 0.28
Usp8Q80U87 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp8Q80U87 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp8Q80U87 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp8Q80U87 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Usp8Q80U87 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Usp8Q80U87 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Usp8Q80U87 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Usp8Q80U87 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp8Q80U87 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Usp8Q80U87 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Usp8Q80U87 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp8Q80U87 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Usp8Q80U87 Gm10653-202ENSMUST00000139570 835 ntBASIC16.81■□□□□ 0.28
Usp8Q80U87 Gm20760-201ENSMUST00000179197 648 ntBASIC16.81■□□□□ 0.28
Usp8Q80U87 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp8Q80U87 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Usp8Q80U87 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp8Q80U87 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp8Q80U87 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp8Q80U87 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp8Q80U87 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp8Q80U87 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp8Q80U87 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp8Q80U87 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Usp8Q80U87 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp8Q80U87 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.8■□□□□ 0.28
Usp8Q80U87 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp8Q80U87 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp8Q80U87 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp8Q80U87 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp8Q80U87 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Usp8Q80U87 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp8Q80U87 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp8Q80U87 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp8Q80U87 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp8Q80U87 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp8Q80U87 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.8■□□□□ 0.28
Usp8Q80U87 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp8Q80U87 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.8■□□□□ 0.28
Usp8Q80U87 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Usp8Q80U87 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp8Q80U87 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.8■□□□□ 0.28
Usp8Q80U87 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp8Q80U87 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp8Q80U87 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Usp8Q80U87 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.79■□□□□ 0.28
Usp8Q80U87 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Usp8Q80U87 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.79■□□□□ 0.28
Usp8Q80U87 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Usp8Q80U87 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Usp8Q80U87 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp8Q80U87 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Usp8Q80U87 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp8Q80U87 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp8Q80U87 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp8Q80U87 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp8Q80U87 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp8Q80U87 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.79■□□□□ 0.28
Usp8Q80U87 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp8Q80U87 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Usp8Q80U87 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Usp8Q80U87 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms