Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh19Q80TF3 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdh19Q80TF3 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh19Q80TF3 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh19Q80TF3 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh19Q80TF3 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Pcdh19Q80TF3 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh19Q80TF3 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Pcdh19Q80TF3 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh19Q80TF3 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh19Q80TF3 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh19Q80TF3 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh19Q80TF3 Gm13186-201ENSMUST00000118031 316 ntBASIC16.46■□□□□ 0.23
Pcdh19Q80TF3 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.46■□□□□ 0.23
Pcdh19Q80TF3 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh19Q80TF3 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.46■□□□□ 0.23
Pcdh19Q80TF3 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.46■□□□□ 0.23
Pcdh19Q80TF3 Gm45328-201ENSMUST00000210942 917 ntBASIC16.46■□□□□ 0.23
Pcdh19Q80TF3 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh19Q80TF3 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdh19Q80TF3 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh19Q80TF3 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Pcdh19Q80TF3 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.45■□□□□ 0.22
Pcdh19Q80TF3 Gm9103-201ENSMUST00000119371 405 ntBASIC16.45■□□□□ 0.22
Pcdh19Q80TF3 Gm18115-201ENSMUST00000221209 621 ntBASIC16.45■□□□□ 0.22
Pcdh19Q80TF3 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh19Q80TF3 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Pcdh19Q80TF3 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh19Q80TF3 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh19Q80TF3 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh19Q80TF3 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh19Q80TF3 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh19Q80TF3 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
Pcdh19Q80TF3 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdh19Q80TF3 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh19Q80TF3 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh19Q80TF3 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh19Q80TF3 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh19Q80TF3 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh19Q80TF3 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh19Q80TF3 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh19Q80TF3 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh19Q80TF3 Ank2-226ENSMUST00000189368 339 ntBASIC16.44■□□□□ 0.22
Pcdh19Q80TF3 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh19Q80TF3 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh19Q80TF3 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.44■□□□□ 0.22
Pcdh19Q80TF3 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.44■□□□□ 0.22
Pcdh19Q80TF3 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh19Q80TF3 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh19Q80TF3 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh19Q80TF3 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh19Q80TF3 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh19Q80TF3 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh19Q80TF3 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh19Q80TF3 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh19Q80TF3 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdh19Q80TF3 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh19Q80TF3 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Pcdh19Q80TF3 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Pcdh19Q80TF3 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh19Q80TF3 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Pcdh19Q80TF3 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Pcdh19Q80TF3 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh19Q80TF3 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh19Q80TF3 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh19Q80TF3 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh19Q80TF3 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh19Q80TF3 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh19Q80TF3 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh19Q80TF3 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh19Q80TF3 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh19Q80TF3 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh19Q80TF3 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh19Q80TF3 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh19Q80TF3 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdh19Q80TF3 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh19Q80TF3 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh19Q80TF3 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh19Q80TF3 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh19Q80TF3 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh19Q80TF3 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Pcdh19Q80TF3 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh19Q80TF3 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Pcdh19Q80TF3 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh19Q80TF3 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh19Q80TF3 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh19Q80TF3 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.42■□□□□ 0.22
Pcdh19Q80TF3 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16.42■□□□□ 0.22
Pcdh19Q80TF3 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh19Q80TF3 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Pcdh19Q80TF3 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh19Q80TF3 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Pcdh19Q80TF3 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.42■□□□□ 0.22
Pcdh19Q80TF3 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh19Q80TF3 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh19Q80TF3 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh19Q80TF3 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh19Q80TF3 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.42■□□□□ 0.22
Pcdh19Q80TF3 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdh19Q80TF3 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms