Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Rpap1Q80TE0 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Rpap1Q80TE0 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
Rpap1Q80TE0 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Rpap1Q80TE0 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
Rpap1Q80TE0 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Rpap1Q80TE0 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
Rpap1Q80TE0 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Rpap1Q80TE0 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Rpap1Q80TE0 Gm6736-201ENSMUST00000166583 948 ntBASIC25.96■■□□□ 1.75
Rpap1Q80TE0 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Rpap1Q80TE0 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
Rpap1Q80TE0 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC25.96■■□□□ 1.75
Rpap1Q80TE0 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
Rpap1Q80TE0 Gm45203-201ENSMUST00000206384 1831 ntBASIC25.95■■□□□ 1.75
Rpap1Q80TE0 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
Rpap1Q80TE0 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
Rpap1Q80TE0 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
Rpap1Q80TE0 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC25.95■■□□□ 1.74
Rpap1Q80TE0 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Rpap1Q80TE0 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC25.95■■□□□ 1.74
Rpap1Q80TE0 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Rpap1Q80TE0 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC25.95■■□□□ 1.74
Rpap1Q80TE0 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC25.95■■□□□ 1.74
Rpap1Q80TE0 Gm14494-201ENSMUST00000118786 435 ntBASIC25.95■■□□□ 1.74
Rpap1Q80TE0 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC25.95■■□□□ 1.74
Rpap1Q80TE0 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Rpap1Q80TE0 AC154222.1-201ENSMUST00000223882 475 ntBASIC25.95■■□□□ 1.74
Rpap1Q80TE0 Gm15590-201ENSMUST00000078419 552 ntBASIC25.95■■□□□ 1.74
Rpap1Q80TE0 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.74
Rpap1Q80TE0 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.74
Rpap1Q80TE0 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Rpap1Q80TE0 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Rpap1Q80TE0 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Rpap1Q80TE0 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC25.94■■□□□ 1.74
Rpap1Q80TE0 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC25.94■■□□□ 1.74
Rpap1Q80TE0 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC25.94■■□□□ 1.74
Rpap1Q80TE0 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC25.94■■□□□ 1.74
Rpap1Q80TE0 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC25.94■■□□□ 1.74
Rpap1Q80TE0 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
Rpap1Q80TE0 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Rpap1Q80TE0 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC25.94■■□□□ 1.74
Rpap1Q80TE0 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Rpap1Q80TE0 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC25.93■■□□□ 1.74
Rpap1Q80TE0 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Rpap1Q80TE0 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
Rpap1Q80TE0 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Rpap1Q80TE0 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC25.93■■□□□ 1.74
Rpap1Q80TE0 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Rpap1Q80TE0 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC25.93■■□□□ 1.74
Rpap1Q80TE0 AC127349.1-201ENSMUST00000224590 266 ntBASIC25.93■■□□□ 1.74
Rpap1Q80TE0 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Rpap1Q80TE0 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC25.92■■□□□ 1.74
Rpap1Q80TE0 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC25.92■■□□□ 1.74
Rpap1Q80TE0 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Rpap1Q80TE0 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC25.92■■□□□ 1.74
Rpap1Q80TE0 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Rpap1Q80TE0 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Rpap1Q80TE0 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
Rpap1Q80TE0 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Rpap1Q80TE0 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
Rpap1Q80TE0 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
Rpap1Q80TE0 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Rpap1Q80TE0 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Rpap1Q80TE0 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC25.91■■□□□ 1.74
Rpap1Q80TE0 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
Rpap1Q80TE0 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Rpap1Q80TE0 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Rpap1Q80TE0 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
Rpap1Q80TE0 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
Rpap1Q80TE0 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
Rpap1Q80TE0 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC25.91■■□□□ 1.74
Rpap1Q80TE0 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
Rpap1Q80TE0 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Rpap1Q80TE0 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC25.9■■□□□ 1.74
Rpap1Q80TE0 Gm14140-201ENSMUST00000119999 995 ntBASIC25.9■■□□□ 1.74
Rpap1Q80TE0 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Rpap1Q80TE0 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Rpap1Q80TE0 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
Rpap1Q80TE0 AC114585.2-202ENSMUST00000228094 426 ntBASIC25.9■■□□□ 1.74
Rpap1Q80TE0 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Rpap1Q80TE0 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC25.9■■□□□ 1.74
Rpap1Q80TE0 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Rpap1Q80TE0 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Rpap1Q80TE0 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Rpap1Q80TE0 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
Rpap1Q80TE0 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.74
Rpap1Q80TE0 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.74
Rpap1Q80TE0 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Rpap1Q80TE0 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Rpap1Q80TE0 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC25.89■■□□□ 1.74
Rpap1Q80TE0 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Rpap1Q80TE0 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC25.89■■□□□ 1.74
Rpap1Q80TE0 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Rpap1Q80TE0 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Rpap1Q80TE0 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Rpap1Q80TE0 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC25.89■■□□□ 1.74
Rpap1Q80TE0 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Rpap1Q80TE0 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.74
Rpap1Q80TE0 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms