Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Scn4bQ7M729 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn4bQ7M729 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn4bQ7M729 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn4bQ7M729 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn4bQ7M729 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.33■□□□□ 0.2
Scn4bQ7M729 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn4bQ7M729 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn4bQ7M729 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Scn4bQ7M729 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn4bQ7M729 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn4bQ7M729 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn4bQ7M729 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.32■□□□□ 0.2
Scn4bQ7M729 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Scn4bQ7M729 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Scn4bQ7M729 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn4bQ7M729 Mir6982-201ENSMUST00000184354 68 ntBASIC16.32■□□□□ 0.2
Scn4bQ7M729 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn4bQ7M729 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.32■□□□□ 0.2
Scn4bQ7M729 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.32■□□□□ 0.2
Scn4bQ7M729 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.32■□□□□ 0.2
Scn4bQ7M729 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn4bQ7M729 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn4bQ7M729 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn4bQ7M729 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Scn4bQ7M729 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn4bQ7M729 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn4bQ7M729 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Scn4bQ7M729 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC16.32■□□□□ 0.2
Scn4bQ7M729 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn4bQ7M729 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn4bQ7M729 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn4bQ7M729 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn4bQ7M729 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn4bQ7M729 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.31■□□□□ 0.2
Scn4bQ7M729 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Scn4bQ7M729 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn4bQ7M729 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn4bQ7M729 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Scn4bQ7M729 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn4bQ7M729 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn4bQ7M729 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn4bQ7M729 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn4bQ7M729 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn4bQ7M729 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn4bQ7M729 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Scn4bQ7M729 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Scn4bQ7M729 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn4bQ7M729 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn4bQ7M729 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Scn4bQ7M729 Gm30025-201ENSMUST00000218555 728 ntBASIC16.31■□□□□ 0.2
Scn4bQ7M729 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn4bQ7M729 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn4bQ7M729 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Scn4bQ7M729 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Scn4bQ7M729 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.31■□□□□ 0.2
Scn4bQ7M729 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn4bQ7M729 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn4bQ7M729 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn4bQ7M729 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Scn4bQ7M729 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn4bQ7M729 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Scn4bQ7M729 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.3■□□□□ 0.2
Scn4bQ7M729 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn4bQ7M729 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn4bQ7M729 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn4bQ7M729 Haglr-201ENSMUST00000100000 2085 ntBASIC16.3■□□□□ 0.2
Scn4bQ7M729 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn4bQ7M729 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Scn4bQ7M729 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn4bQ7M729 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn4bQ7M729 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Scn4bQ7M729 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.3■□□□□ 0.2
Scn4bQ7M729 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.3■□□□□ 0.2
Scn4bQ7M729 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.3■□□□□ 0.2
Scn4bQ7M729 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Scn4bQ7M729 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn4bQ7M729 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn4bQ7M729 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn4bQ7M729 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Scn4bQ7M729 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn4bQ7M729 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Scn4bQ7M729 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scn4bQ7M729 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Scn4bQ7M729 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn4bQ7M729 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.29■□□□□ 0.2
Scn4bQ7M729 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn4bQ7M729 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn4bQ7M729 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.29■□□□□ 0.2
Scn4bQ7M729 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Scn4bQ7M729 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scn4bQ7M729 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Scn4bQ7M729 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.29■□□□□ 0.2
Scn4bQ7M729 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Scn4bQ7M729 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Scn4bQ7M729 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Scn4bQ7M729 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Scn4bQ7M729 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.29■□□□□ 0.2
Scn4bQ7M729 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Scn4bQ7M729 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms