Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Vma21Q78T54 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vma21Q78T54 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Vma21Q78T54 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.69□□□□□ -0.22
Vma21Q78T54 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vma21Q78T54 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vma21Q78T54 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Vma21Q78T54 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vma21Q78T54 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vma21Q78T54 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vma21Q78T54 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vma21Q78T54 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vma21Q78T54 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Vma21Q78T54 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vma21Q78T54 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Vma21Q78T54 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vma21Q78T54 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vma21Q78T54 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vma21Q78T54 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vma21Q78T54 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vma21Q78T54 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Vma21Q78T54 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vma21Q78T54 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC13.68□□□□□ -0.22
Vma21Q78T54 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vma21Q78T54 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC13.68□□□□□ -0.22
Vma21Q78T54 AC164629.5-201ENSMUST00000220387 632 ntBASIC13.68□□□□□ -0.22
Vma21Q78T54 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vma21Q78T54 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vma21Q78T54 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vma21Q78T54 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vma21Q78T54 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vma21Q78T54 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vma21Q78T54 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vma21Q78T54 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Vma21Q78T54 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vma21Q78T54 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vma21Q78T54 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vma21Q78T54 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vma21Q78T54 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vma21Q78T54 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Vma21Q78T54 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vma21Q78T54 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vma21Q78T54 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vma21Q78T54 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vma21Q78T54 Gm26596-201ENSMUST00000180464 2655 ntBASIC13.67□□□□□ -0.22
Vma21Q78T54 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vma21Q78T54 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Vma21Q78T54 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Vma21Q78T54 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Vma21Q78T54 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Vma21Q78T54 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vma21Q78T54 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC13.67□□□□□ -0.22
Vma21Q78T54 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vma21Q78T54 Gm37292-201ENSMUST00000192062 758 ntBASIC13.67□□□□□ -0.22
Vma21Q78T54 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
Vma21Q78T54 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vma21Q78T54 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vma21Q78T54 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Vma21Q78T54 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vma21Q78T54 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vma21Q78T54 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vma21Q78T54 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vma21Q78T54 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vma21Q78T54 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vma21Q78T54 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vma21Q78T54 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Vma21Q78T54 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vma21Q78T54 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
Vma21Q78T54 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
Vma21Q78T54 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vma21Q78T54 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vma21Q78T54 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vma21Q78T54 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vma21Q78T54 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vma21Q78T54 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vma21Q78T54 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC13.66□□□□□ -0.22
Vma21Q78T54 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vma21Q78T54 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vma21Q78T54 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vma21Q78T54 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vma21Q78T54 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC13.66□□□□□ -0.22
Vma21Q78T54 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC13.66□□□□□ -0.22
Vma21Q78T54 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC13.66□□□□□ -0.22
Vma21Q78T54 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC13.66□□□□□ -0.22
Vma21Q78T54 Gm24841-201ENSMUST00000158676 357 ntBASIC13.66□□□□□ -0.22
Vma21Q78T54 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC13.66□□□□□ -0.22
Vma21Q78T54 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vma21Q78T54 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vma21Q78T54 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Vma21Q78T54 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vma21Q78T54 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
Vma21Q78T54 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vma21Q78T54 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vma21Q78T54 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC13.66□□□□□ -0.22
Vma21Q78T54 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vma21Q78T54 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vma21Q78T54 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vma21Q78T54 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vma21Q78T54 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vma21Q78T54 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms