Protein–RNA interactions for Protein: Q78RX3

Smim12, Small integral membrane protein 12, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim12Q78RX3 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.13□□□□□ -0.15
Smim12Q78RX3 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC14.13□□□□□ -0.15
Smim12Q78RX3 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smim12Q78RX3 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smim12Q78RX3 Gm9731-201ENSMUST00000209480 747 ntBASIC14.13□□□□□ -0.15
Smim12Q78RX3 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smim12Q78RX3 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Smim12Q78RX3 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smim12Q78RX3 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smim12Q78RX3 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smim12Q78RX3 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.13□□□□□ -0.15
Smim12Q78RX3 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Smim12Q78RX3 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Smim12Q78RX3 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smim12Q78RX3 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Smim12Q78RX3 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smim12Q78RX3 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Smim12Q78RX3 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Smim12Q78RX3 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Smim12Q78RX3 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smim12Q78RX3 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smim12Q78RX3 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Smim12Q78RX3 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Smim12Q78RX3 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smim12Q78RX3 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14.12□□□□□ -0.15
Smim12Q78RX3 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smim12Q78RX3 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smim12Q78RX3 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smim12Q78RX3 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smim12Q78RX3 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC14.12□□□□□ -0.15
Smim12Q78RX3 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC14.12□□□□□ -0.15
Smim12Q78RX3 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Smim12Q78RX3 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smim12Q78RX3 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Smim12Q78RX3 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smim12Q78RX3 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smim12Q78RX3 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smim12Q78RX3 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smim12Q78RX3 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Smim12Q78RX3 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Smim12Q78RX3 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smim12Q78RX3 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smim12Q78RX3 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smim12Q78RX3 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smim12Q78RX3 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smim12Q78RX3 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smim12Q78RX3 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smim12Q78RX3 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Smim12Q78RX3 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smim12Q78RX3 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smim12Q78RX3 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.11□□□□□ -0.15
Smim12Q78RX3 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smim12Q78RX3 Gm27275-201ENSMUST00000184318 272 ntBASIC14.11□□□□□ -0.15
Smim12Q78RX3 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC14.11□□□□□ -0.15
Smim12Q78RX3 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smim12Q78RX3 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smim12Q78RX3 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Smim12Q78RX3 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smim12Q78RX3 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smim12Q78RX3 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smim12Q78RX3 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smim12Q78RX3 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smim12Q78RX3 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Smim12Q78RX3 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smim12Q78RX3 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smim12Q78RX3 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smim12Q78RX3 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smim12Q78RX3 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Smim12Q78RX3 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smim12Q78RX3 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Smim12Q78RX3 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Smim12Q78RX3 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.1□□□□□ -0.15
Smim12Q78RX3 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Smim12Q78RX3 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Smim12Q78RX3 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smim12Q78RX3 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smim12Q78RX3 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC14.1□□□□□ -0.15
Smim12Q78RX3 Gm43183-201ENSMUST00000200632 547 ntBASIC14.1□□□□□ -0.15
Smim12Q78RX3 Gm20049-201ENSMUST00000219950 730 ntBASIC14.1□□□□□ -0.15
Smim12Q78RX3 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smim12Q78RX3 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smim12Q78RX3 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Smim12Q78RX3 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smim12Q78RX3 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.1□□□□□ -0.15
Smim12Q78RX3 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Smim12Q78RX3 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smim12Q78RX3 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Smim12Q78RX3 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smim12Q78RX3 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smim12Q78RX3 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Smim12Q78RX3 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.1□□□□□ -0.15
Smim12Q78RX3 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smim12Q78RX3 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Smim12Q78RX3 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Smim12Q78RX3 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Smim12Q78RX3 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smim12Q78RX3 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smim12Q78RX3 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smim12Q78RX3 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Smim12Q78RX3 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms