Protein–RNA interactions for Protein: Q70E20

Sned1, Sushi, nidogen and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sned1Q70E20 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Sned1Q70E20 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sned1Q70E20 Gm13127-201ENSMUST00000118978 1389 ntBASIC20.24■□□□□ 0.83
Sned1Q70E20 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC20.23■□□□□ 0.83
Sned1Q70E20 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Sned1Q70E20 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sned1Q70E20 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Sned1Q70E20 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC20.23■□□□□ 0.83
Sned1Q70E20 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC20.23■□□□□ 0.83
Sned1Q70E20 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Sned1Q70E20 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Sned1Q70E20 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
Sned1Q70E20 Gm25406-201ENSMUST00000157599 105 ntBASIC20.23■□□□□ 0.83
Sned1Q70E20 Gm5682-201ENSMUST00000173402 505 ntBASIC20.23■□□□□ 0.83
Sned1Q70E20 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC20.23■□□□□ 0.83
Sned1Q70E20 Gm9172-201ENSMUST00000212092 954 ntBASIC20.23■□□□□ 0.83
Sned1Q70E20 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sned1Q70E20 Gm8396-201ENSMUST00000057361 823 ntBASIC20.23■□□□□ 0.83
Sned1Q70E20 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sned1Q70E20 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sned1Q70E20 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sned1Q70E20 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Sned1Q70E20 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sned1Q70E20 Tfap2a-209ENSMUST00000225180 1828 ntBASIC20.23■□□□□ 0.83
Sned1Q70E20 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sned1Q70E20 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Sned1Q70E20 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.22■□□□□ 0.83
Sned1Q70E20 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Sned1Q70E20 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sned1Q70E20 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sned1Q70E20 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC20.22■□□□□ 0.83
Sned1Q70E20 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Sned1Q70E20 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sned1Q70E20 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Sned1Q70E20 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sned1Q70E20 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sned1Q70E20 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sned1Q70E20 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Sned1Q70E20 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.22■□□□□ 0.83
Sned1Q70E20 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sned1Q70E20 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Sned1Q70E20 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC20.22■□□□□ 0.83
Sned1Q70E20 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sned1Q70E20 Gm11764-201ENSMUST00000120221 623 ntBASIC20.21■□□□□ 0.83
Sned1Q70E20 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Sned1Q70E20 Gm27321-201ENSMUST00000185021 205 ntBASIC20.21■□□□□ 0.83
Sned1Q70E20 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Sned1Q70E20 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC20.21■□□□□ 0.83
Sned1Q70E20 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sned1Q70E20 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sned1Q70E20 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Sned1Q70E20 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sned1Q70E20 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sned1Q70E20 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Sned1Q70E20 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC20.2■□□□□ 0.82
Sned1Q70E20 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sned1Q70E20 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sned1Q70E20 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sned1Q70E20 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sned1Q70E20 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Sned1Q70E20 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Sned1Q70E20 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sned1Q70E20 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sned1Q70E20 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Sned1Q70E20 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC20.19■□□□□ 0.82
Sned1Q70E20 Gm5253-201ENSMUST00000187104 1025 ntBASIC20.19■□□□□ 0.82
Sned1Q70E20 Gm44872-201ENSMUST00000207864 420 ntBASIC20.19■□□□□ 0.82
Sned1Q70E20 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
Sned1Q70E20 AC124549.3-201ENSMUST00000225541 367 ntBASIC20.19■□□□□ 0.82
Sned1Q70E20 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sned1Q70E20 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sned1Q70E20 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Sned1Q70E20 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sned1Q70E20 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Sned1Q70E20 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sned1Q70E20 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.19■□□□□ 0.82
Sned1Q70E20 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sned1Q70E20 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC20.19■□□□□ 0.82
Sned1Q70E20 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Sned1Q70E20 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC20.19■□□□□ 0.82
Sned1Q70E20 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC20.19■□□□□ 0.82
Sned1Q70E20 Ddx41-204ENSMUST00000224765 2199 ntBASIC20.18■□□□□ 0.82
Sned1Q70E20 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sned1Q70E20 Slc35b2-202ENSMUST00000223987 1766 ntBASIC20.18■□□□□ 0.82
Sned1Q70E20 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.18■□□□□ 0.82
Sned1Q70E20 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sned1Q70E20 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sned1Q70E20 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC20.18■□□□□ 0.82
Sned1Q70E20 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
Sned1Q70E20 Gm27646-201ENSMUST00000183989 110 ntBASIC20.18■□□□□ 0.82
Sned1Q70E20 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC20.18■□□□□ 0.82
Sned1Q70E20 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sned1Q70E20 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sned1Q70E20 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sned1Q70E20 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sned1Q70E20 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.17■□□□□ 0.82
Sned1Q70E20 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sned1Q70E20 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Sned1Q70E20 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Sned1Q70E20 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms