Protein–RNA interactions for Protein: Q6XAS4

Ssxb3, SSXB3 protein, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssxb3Q6XAS4 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Ssxb3Q6XAS4 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.63■□□□□ 0.25
Ssxb3Q6XAS4 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ssxb3Q6XAS4 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ssxb3Q6XAS4 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ssxb3Q6XAS4 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ssxb3Q6XAS4 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ssxb3Q6XAS4 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ssxb3Q6XAS4 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.63■□□□□ 0.25
Ssxb3Q6XAS4 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ssxb3Q6XAS4 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ssxb3Q6XAS4 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ssxb3Q6XAS4 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Ssxb3Q6XAS4 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ssxb3Q6XAS4 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.62■□□□□ 0.25
Ssxb3Q6XAS4 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ssxb3Q6XAS4 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ssxb3Q6XAS4 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ssxb3Q6XAS4 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ssxb3Q6XAS4 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.62■□□□□ 0.25
Ssxb3Q6XAS4 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ssxb3Q6XAS4 Gm18958-201ENSMUST00000174258 762 ntBASIC16.62■□□□□ 0.25
Ssxb3Q6XAS4 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.62■□□□□ 0.25
Ssxb3Q6XAS4 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.62■□□□□ 0.25
Ssxb3Q6XAS4 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ssxb3Q6XAS4 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ssxb3Q6XAS4 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Ssxb3Q6XAS4 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.62■□□□□ 0.25
Ssxb3Q6XAS4 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ssxb3Q6XAS4 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ssxb3Q6XAS4 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ssxb3Q6XAS4 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ssxb3Q6XAS4 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ssxb3Q6XAS4 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.61■□□□□ 0.25
Ssxb3Q6XAS4 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ssxb3Q6XAS4 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ssxb3Q6XAS4 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ssxb3Q6XAS4 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ssxb3Q6XAS4 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ssxb3Q6XAS4 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ssxb3Q6XAS4 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ssxb3Q6XAS4 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
Ssxb3Q6XAS4 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ssxb3Q6XAS4 Gm7791-201ENSMUST00000219066 539 ntBASIC16.61■□□□□ 0.25
Ssxb3Q6XAS4 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ssxb3Q6XAS4 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Ssxb3Q6XAS4 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ssxb3Q6XAS4 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ssxb3Q6XAS4 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ssxb3Q6XAS4 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Ssxb3Q6XAS4 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Ssxb3Q6XAS4 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Ssxb3Q6XAS4 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ssxb3Q6XAS4 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ssxb3Q6XAS4 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ssxb3Q6XAS4 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.6■□□□□ 0.25
Ssxb3Q6XAS4 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ssxb3Q6XAS4 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ssxb3Q6XAS4 Gm715-201ENSMUST00000117865 831 ntBASIC16.6■□□□□ 0.25
Ssxb3Q6XAS4 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.6■□□□□ 0.25
Ssxb3Q6XAS4 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ssxb3Q6XAS4 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.6■□□□□ 0.25
Ssxb3Q6XAS4 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ssxb3Q6XAS4 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ssxb3Q6XAS4 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ssxb3Q6XAS4 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ssxb3Q6XAS4 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ssxb3Q6XAS4 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Ssxb3Q6XAS4 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ssxb3Q6XAS4 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ssxb3Q6XAS4 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ssxb3Q6XAS4 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Ssxb3Q6XAS4 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Ssxb3Q6XAS4 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Ssxb3Q6XAS4 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.59■□□□□ 0.25
Ssxb3Q6XAS4 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ssxb3Q6XAS4 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ssxb3Q6XAS4 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ssxb3Q6XAS4 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.59■□□□□ 0.25
Ssxb3Q6XAS4 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ssxb3Q6XAS4 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.59■□□□□ 0.25
Ssxb3Q6XAS4 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.59■□□□□ 0.25
Ssxb3Q6XAS4 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Ssxb3Q6XAS4 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Ssxb3Q6XAS4 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.59■□□□□ 0.25
Ssxb3Q6XAS4 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.59■□□□□ 0.25
Ssxb3Q6XAS4 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ssxb3Q6XAS4 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Ssxb3Q6XAS4 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ssxb3Q6XAS4 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ssxb3Q6XAS4 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Ssxb3Q6XAS4 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Ssxb3Q6XAS4 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.59■□□□□ 0.25
Ssxb3Q6XAS4 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Ssxb3Q6XAS4 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Ssxb3Q6XAS4 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Ssxb3Q6XAS4 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Ssxb3Q6XAS4 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Ssxb3Q6XAS4 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Ssxb3Q6XAS4 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms