Protein–RNA interactions for Protein: Q6TDU8

Casc1, Protein CASC1, mousemouse

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc1Q6TDU8 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Casc1Q6TDU8 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Casc1Q6TDU8 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Casc1Q6TDU8 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Casc1Q6TDU8 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Casc1Q6TDU8 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Casc1Q6TDU8 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Casc1Q6TDU8 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Casc1Q6TDU8 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Casc1Q6TDU8 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC20.04■□□□□ 0.8
Casc1Q6TDU8 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Casc1Q6TDU8 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Casc1Q6TDU8 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Casc1Q6TDU8 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Casc1Q6TDU8 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
Casc1Q6TDU8 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Casc1Q6TDU8 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Casc1Q6TDU8 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Casc1Q6TDU8 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Casc1Q6TDU8 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
Casc1Q6TDU8 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Casc1Q6TDU8 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Casc1Q6TDU8 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Casc1Q6TDU8 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Casc1Q6TDU8 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Casc1Q6TDU8 Gm21814-202ENSMUST00000203277 873 ntBASIC20.03■□□□□ 0.8
Casc1Q6TDU8 AC156016.1-201ENSMUST00000227190 1035 ntBASIC20.03■□□□□ 0.8
Casc1Q6TDU8 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Casc1Q6TDU8 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Casc1Q6TDU8 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Casc1Q6TDU8 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Casc1Q6TDU8 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Casc1Q6TDU8 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Casc1Q6TDU8 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Casc1Q6TDU8 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Casc1Q6TDU8 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Casc1Q6TDU8 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Casc1Q6TDU8 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Casc1Q6TDU8 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Casc1Q6TDU8 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Casc1Q6TDU8 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Casc1Q6TDU8 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Casc1Q6TDU8 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Casc1Q6TDU8 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Casc1Q6TDU8 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Casc1Q6TDU8 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Casc1Q6TDU8 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Casc1Q6TDU8 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Casc1Q6TDU8 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Casc1Q6TDU8 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Casc1Q6TDU8 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Casc1Q6TDU8 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Casc1Q6TDU8 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.02■□□□□ 0.8
Casc1Q6TDU8 Timm23-208ENSMUST00000226683 750 ntBASIC20.02■□□□□ 0.8
Casc1Q6TDU8 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Casc1Q6TDU8 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Casc1Q6TDU8 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Casc1Q6TDU8 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Casc1Q6TDU8 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Casc1Q6TDU8 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Casc1Q6TDU8 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Casc1Q6TDU8 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Casc1Q6TDU8 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Casc1Q6TDU8 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Casc1Q6TDU8 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Casc1Q6TDU8 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Casc1Q6TDU8 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC20.01■□□□□ 0.79
Casc1Q6TDU8 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Casc1Q6TDU8 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Casc1Q6TDU8 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Casc1Q6TDU8 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Casc1Q6TDU8 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Casc1Q6TDU8 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20.01■□□□□ 0.79
Casc1Q6TDU8 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Casc1Q6TDU8 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Casc1Q6TDU8 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC20.01■□□□□ 0.79
Casc1Q6TDU8 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.01■□□□□ 0.79
Casc1Q6TDU8 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Casc1Q6TDU8 AC125311.2-201ENSMUST00000227477 1940 ntBASIC20.01■□□□□ 0.79
Casc1Q6TDU8 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Casc1Q6TDU8 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Casc1Q6TDU8 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Casc1Q6TDU8 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Casc1Q6TDU8 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Casc1Q6TDU8 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Casc1Q6TDU8 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Casc1Q6TDU8 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC20■□□□□ 0.79
Casc1Q6TDU8 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Casc1Q6TDU8 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Casc1Q6TDU8 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Casc1Q6TDU8 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
Casc1Q6TDU8 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Casc1Q6TDU8 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC20■□□□□ 0.79
Casc1Q6TDU8 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20■□□□□ 0.79
Casc1Q6TDU8 Gm4974-201ENSMUST00000209974 875 ntBASIC20■□□□□ 0.79
Casc1Q6TDU8 Odf3b-204ENSMUST00000227834 930 ntBASIC20■□□□□ 0.79
Casc1Q6TDU8 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Casc1Q6TDU8 Gm5417-201ENSMUST00000079706 384 ntBASIC20■□□□□ 0.79
Casc1Q6TDU8 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Casc1Q6TDU8 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms