Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Scn10aQ6QIY3 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn10aQ6QIY3 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn10aQ6QIY3 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn10aQ6QIY3 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn10aQ6QIY3 Gm7222-201ENSMUST00000117512 906 ntBASIC18.96■□□□□ 0.63
Scn10aQ6QIY3 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Scn10aQ6QIY3 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn10aQ6QIY3 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Scn10aQ6QIY3 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC18.96■□□□□ 0.63
Scn10aQ6QIY3 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC18.96■□□□□ 0.63
Scn10aQ6QIY3 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn10aQ6QIY3 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Scn10aQ6QIY3 Gm3928-201ENSMUST00000121141 1307 ntBASIC18.96■□□□□ 0.63
Scn10aQ6QIY3 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Scn10aQ6QIY3 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn10aQ6QIY3 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Scn10aQ6QIY3 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Scn10aQ6QIY3 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Scn10aQ6QIY3 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC18.95■□□□□ 0.62
Scn10aQ6QIY3 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn10aQ6QIY3 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC18.95■□□□□ 0.62
Scn10aQ6QIY3 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC18.95■□□□□ 0.62
Scn10aQ6QIY3 Auts2-212ENSMUST00000178555 309 ntBASIC18.95■□□□□ 0.62
Scn10aQ6QIY3 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn10aQ6QIY3 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Scn10aQ6QIY3 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Scn10aQ6QIY3 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn10aQ6QIY3 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn10aQ6QIY3 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Scn10aQ6QIY3 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn10aQ6QIY3 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn10aQ6QIY3 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn10aQ6QIY3 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn10aQ6QIY3 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn10aQ6QIY3 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Scn10aQ6QIY3 Gm37500-201ENSMUST00000192059 1443 ntBASIC18.95■□□□□ 0.62
Scn10aQ6QIY3 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Scn10aQ6QIY3 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC18.94■□□□□ 0.62
Scn10aQ6QIY3 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn10aQ6QIY3 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn10aQ6QIY3 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn10aQ6QIY3 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
Scn10aQ6QIY3 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn10aQ6QIY3 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Scn10aQ6QIY3 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Scn10aQ6QIY3 Gm5682-201ENSMUST00000173402 505 ntBASIC18.94■□□□□ 0.62
Scn10aQ6QIY3 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC18.94■□□□□ 0.62
Scn10aQ6QIY3 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.94■□□□□ 0.62
Scn10aQ6QIY3 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn10aQ6QIY3 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Scn10aQ6QIY3 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn10aQ6QIY3 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn10aQ6QIY3 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn10aQ6QIY3 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn10aQ6QIY3 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC18.94■□□□□ 0.62
Scn10aQ6QIY3 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn10aQ6QIY3 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.94■□□□□ 0.62
Scn10aQ6QIY3 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Scn10aQ6QIY3 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn10aQ6QIY3 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn10aQ6QIY3 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC18.93■□□□□ 0.62
Scn10aQ6QIY3 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Scn10aQ6QIY3 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Scn10aQ6QIY3 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn10aQ6QIY3 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Scn10aQ6QIY3 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Scn10aQ6QIY3 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Scn10aQ6QIY3 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn10aQ6QIY3 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn10aQ6QIY3 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn10aQ6QIY3 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn10aQ6QIY3 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn10aQ6QIY3 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
Scn10aQ6QIY3 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC18.93■□□□□ 0.62
Scn10aQ6QIY3 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Scn10aQ6QIY3 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC18.93■□□□□ 0.62
Scn10aQ6QIY3 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC18.93■□□□□ 0.62
Scn10aQ6QIY3 Gm8969-201ENSMUST00000199694 526 ntBASIC18.93■□□□□ 0.62
Scn10aQ6QIY3 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC18.93■□□□□ 0.62
Scn10aQ6QIY3 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Scn10aQ6QIY3 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Scn10aQ6QIY3 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC18.93■□□□□ 0.62
Scn10aQ6QIY3 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.93■□□□□ 0.62
Scn10aQ6QIY3 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Scn10aQ6QIY3 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn10aQ6QIY3 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn10aQ6QIY3 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn10aQ6QIY3 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn10aQ6QIY3 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn10aQ6QIY3 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn10aQ6QIY3 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC18.92■□□□□ 0.62
Scn10aQ6QIY3 AC090659.1-201ENSMUST00000224334 768 ntBASIC18.92■□□□□ 0.62
Scn10aQ6QIY3 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Scn10aQ6QIY3 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.92■□□□□ 0.62
Scn10aQ6QIY3 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Scn10aQ6QIY3 Gm7063-201ENSMUST00000186840 981 ntBASIC18.92■□□□□ 0.62
Scn10aQ6QIY3 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC18.92■□□□□ 0.62
Scn10aQ6QIY3 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC18.92■□□□□ 0.62
Scn10aQ6QIY3 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms