Protein–RNA interactions for Protein: Q6PFY8

Trim45, Tripartite motif-containing protein 45, mousemouse

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim45Q6PFY8 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.92■□□□□ 0.14
Trim45Q6PFY8 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim45Q6PFY8 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Trim45Q6PFY8 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim45Q6PFY8 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trim45Q6PFY8 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim45Q6PFY8 Haglr-201ENSMUST00000100000 2085 ntBASIC15.92■□□□□ 0.14
Trim45Q6PFY8 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trim45Q6PFY8 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.92■□□□□ 0.14
Trim45Q6PFY8 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC15.92■□□□□ 0.14
Trim45Q6PFY8 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.92■□□□□ 0.14
Trim45Q6PFY8 AC159205.6-201ENSMUST00000224935 887 ntBASIC15.92■□□□□ 0.14
Trim45Q6PFY8 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim45Q6PFY8 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trim45Q6PFY8 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim45Q6PFY8 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim45Q6PFY8 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim45Q6PFY8 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim45Q6PFY8 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Trim45Q6PFY8 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim45Q6PFY8 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Trim45Q6PFY8 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim45Q6PFY8 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim45Q6PFY8 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Trim45Q6PFY8 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim45Q6PFY8 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim45Q6PFY8 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.91■□□□□ 0.14
Trim45Q6PFY8 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim45Q6PFY8 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
Trim45Q6PFY8 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.91■□□□□ 0.14
Trim45Q6PFY8 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trim45Q6PFY8 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
Trim45Q6PFY8 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim45Q6PFY8 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim45Q6PFY8 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim45Q6PFY8 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Trim45Q6PFY8 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Trim45Q6PFY8 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trim45Q6PFY8 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim45Q6PFY8 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim45Q6PFY8 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Trim45Q6PFY8 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim45Q6PFY8 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC15.91■□□□□ 0.14
Trim45Q6PFY8 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim45Q6PFY8 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim45Q6PFY8 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim45Q6PFY8 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim45Q6PFY8 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Trim45Q6PFY8 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim45Q6PFY8 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Trim45Q6PFY8 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.9■□□□□ 0.14
Trim45Q6PFY8 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Trim45Q6PFY8 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC15.9■□□□□ 0.14
Trim45Q6PFY8 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trim45Q6PFY8 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trim45Q6PFY8 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim45Q6PFY8 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim45Q6PFY8 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim45Q6PFY8 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim45Q6PFY8 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Trim45Q6PFY8 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim45Q6PFY8 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Trim45Q6PFY8 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim45Q6PFY8 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Trim45Q6PFY8 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim45Q6PFY8 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trim45Q6PFY8 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim45Q6PFY8 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trim45Q6PFY8 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trim45Q6PFY8 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim45Q6PFY8 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.89■□□□□ 0.13
Trim45Q6PFY8 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trim45Q6PFY8 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Trim45Q6PFY8 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trim45Q6PFY8 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trim45Q6PFY8 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim45Q6PFY8 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim45Q6PFY8 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim45Q6PFY8 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim45Q6PFY8 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trim45Q6PFY8 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim45Q6PFY8 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.89■□□□□ 0.13
Trim45Q6PFY8 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim45Q6PFY8 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim45Q6PFY8 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trim45Q6PFY8 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trim45Q6PFY8 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.88■□□□□ 0.13
Trim45Q6PFY8 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim45Q6PFY8 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim45Q6PFY8 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
Trim45Q6PFY8 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trim45Q6PFY8 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim45Q6PFY8 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim45Q6PFY8 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trim45Q6PFY8 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim45Q6PFY8 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim45Q6PFY8 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trim45Q6PFY8 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Trim45Q6PFY8 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trim45Q6PFY8 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms