Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Nup98Q6PFD9 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nup98Q6PFD9 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC19.72■□□□□ 0.75
Nup98Q6PFD9 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC19.72■□□□□ 0.75
Nup98Q6PFD9 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC19.72■□□□□ 0.75
Nup98Q6PFD9 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Nup98Q6PFD9 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Nup98Q6PFD9 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Nup98Q6PFD9 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nup98Q6PFD9 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nup98Q6PFD9 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nup98Q6PFD9 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nup98Q6PFD9 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nup98Q6PFD9 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nup98Q6PFD9 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nup98Q6PFD9 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nup98Q6PFD9 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nup98Q6PFD9 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nup98Q6PFD9 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nup98Q6PFD9 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC19.71■□□□□ 0.75
Nup98Q6PFD9 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nup98Q6PFD9 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nup98Q6PFD9 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Nup98Q6PFD9 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nup98Q6PFD9 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nup98Q6PFD9 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nup98Q6PFD9 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nup98Q6PFD9 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Nup98Q6PFD9 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC19.7■□□□□ 0.74
Nup98Q6PFD9 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nup98Q6PFD9 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
Nup98Q6PFD9 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC19.7■□□□□ 0.74
Nup98Q6PFD9 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nup98Q6PFD9 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nup98Q6PFD9 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nup98Q6PFD9 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nup98Q6PFD9 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nup98Q6PFD9 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nup98Q6PFD9 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Nup98Q6PFD9 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nup98Q6PFD9 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nup98Q6PFD9 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC19.69■□□□□ 0.74
Nup98Q6PFD9 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC19.69■□□□□ 0.74
Nup98Q6PFD9 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nup98Q6PFD9 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nup98Q6PFD9 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nup98Q6PFD9 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC19.69■□□□□ 0.74
Nup98Q6PFD9 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Nup98Q6PFD9 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nup98Q6PFD9 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Nup98Q6PFD9 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nup98Q6PFD9 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nup98Q6PFD9 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nup98Q6PFD9 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
Nup98Q6PFD9 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nup98Q6PFD9 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nup98Q6PFD9 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nup98Q6PFD9 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nup98Q6PFD9 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nup98Q6PFD9 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nup98Q6PFD9 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nup98Q6PFD9 Gm32996-201ENSMUST00000199828 1447 ntBASIC19.68■□□□□ 0.74
Nup98Q6PFD9 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nup98Q6PFD9 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nup98Q6PFD9 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nup98Q6PFD9 Gm12497-201ENSMUST00000138778 237 ntBASIC19.68■□□□□ 0.74
Nup98Q6PFD9 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nup98Q6PFD9 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nup98Q6PFD9 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nup98Q6PFD9 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nup98Q6PFD9 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nup98Q6PFD9 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nup98Q6PFD9 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nup98Q6PFD9 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nup98Q6PFD9 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nup98Q6PFD9 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC19.68■□□□□ 0.74
Nup98Q6PFD9 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
Nup98Q6PFD9 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nup98Q6PFD9 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nup98Q6PFD9 Gm6858-201ENSMUST00000208582 1468 ntBASIC19.68■□□□□ 0.74
Nup98Q6PFD9 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nup98Q6PFD9 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC19.67■□□□□ 0.74
Nup98Q6PFD9 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nup98Q6PFD9 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.67■□□□□ 0.74
Nup98Q6PFD9 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nup98Q6PFD9 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nup98Q6PFD9 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nup98Q6PFD9 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nup98Q6PFD9 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Nup98Q6PFD9 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nup98Q6PFD9 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC19.67■□□□□ 0.74
Nup98Q6PFD9 Gm6296-201ENSMUST00000222599 943 ntBASIC19.67■□□□□ 0.74
Nup98Q6PFD9 Vti1a-206ENSMUST00000225529 1244 ntBASIC19.67■□□□□ 0.74
Nup98Q6PFD9 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nup98Q6PFD9 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nup98Q6PFD9 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Nup98Q6PFD9 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nup98Q6PFD9 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nup98Q6PFD9 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nup98Q6PFD9 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms