Protein–RNA interactions for Protein: Q6NZM9

Hdac4, Histone deacetylase 4, mousemouse

Predictions only

Length 1,076 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac4Q6NZM9 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Hdac4Q6NZM9 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hdac4Q6NZM9 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hdac4Q6NZM9 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Hdac4Q6NZM9 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Hdac4Q6NZM9 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Hdac4Q6NZM9 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hdac4Q6NZM9 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hdac4Q6NZM9 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Hdac4Q6NZM9 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Hdac4Q6NZM9 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hdac4Q6NZM9 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hdac4Q6NZM9 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hdac4Q6NZM9 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hdac4Q6NZM9 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hdac4Q6NZM9 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Hdac4Q6NZM9 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hdac4Q6NZM9 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hdac4Q6NZM9 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hdac4Q6NZM9 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hdac4Q6NZM9 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.75■□□□□ 0.59
Hdac4Q6NZM9 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hdac4Q6NZM9 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hdac4Q6NZM9 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Hdac4Q6NZM9 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hdac4Q6NZM9 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hdac4Q6NZM9 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Hdac4Q6NZM9 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Hdac4Q6NZM9 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hdac4Q6NZM9 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hdac4Q6NZM9 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hdac4Q6NZM9 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hdac4Q6NZM9 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Hdac4Q6NZM9 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hdac4Q6NZM9 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hdac4Q6NZM9 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.74■□□□□ 0.59
Hdac4Q6NZM9 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hdac4Q6NZM9 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hdac4Q6NZM9 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hdac4Q6NZM9 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Hdac4Q6NZM9 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.74■□□□□ 0.59
Hdac4Q6NZM9 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hdac4Q6NZM9 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Hdac4Q6NZM9 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
Hdac4Q6NZM9 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hdac4Q6NZM9 Gm13474-201ENSMUST00000122466 815 ntBASIC18.74■□□□□ 0.59
Hdac4Q6NZM9 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.74■□□□□ 0.59
Hdac4Q6NZM9 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hdac4Q6NZM9 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Hdac4Q6NZM9 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hdac4Q6NZM9 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hdac4Q6NZM9 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.73■□□□□ 0.59
Hdac4Q6NZM9 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hdac4Q6NZM9 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hdac4Q6NZM9 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hdac4Q6NZM9 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Hdac4Q6NZM9 Gm10252-201ENSMUST00000209541 832 ntBASIC18.73■□□□□ 0.59
Hdac4Q6NZM9 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.73■□□□□ 0.59
Hdac4Q6NZM9 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hdac4Q6NZM9 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hdac4Q6NZM9 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Hdac4Q6NZM9 Actl10-202ENSMUST00000226583 1501 ntBASIC18.73■□□□□ 0.59
Hdac4Q6NZM9 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Hdac4Q6NZM9 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hdac4Q6NZM9 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hdac4Q6NZM9 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Hdac4Q6NZM9 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hdac4Q6NZM9 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Hdac4Q6NZM9 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hdac4Q6NZM9 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hdac4Q6NZM9 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Hdac4Q6NZM9 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hdac4Q6NZM9 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Hdac4Q6NZM9 Phf7-203ENSMUST00000226565 1971 ntBASIC18.72■□□□□ 0.59
Hdac4Q6NZM9 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hdac4Q6NZM9 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Hdac4Q6NZM9 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hdac4Q6NZM9 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.72■□□□□ 0.59
Hdac4Q6NZM9 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Hdac4Q6NZM9 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.72■□□□□ 0.59
Hdac4Q6NZM9 Gm43799-201ENSMUST00000201845 579 ntBASIC18.72■□□□□ 0.59
Hdac4Q6NZM9 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC18.72■□□□□ 0.59
Hdac4Q6NZM9 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hdac4Q6NZM9 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hdac4Q6NZM9 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hdac4Q6NZM9 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Hdac4Q6NZM9 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hdac4Q6NZM9 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hdac4Q6NZM9 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
Hdac4Q6NZM9 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
Hdac4Q6NZM9 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hdac4Q6NZM9 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Hdac4Q6NZM9 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Hdac4Q6NZM9 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Hdac4Q6NZM9 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Hdac4Q6NZM9 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Hdac4Q6NZM9 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Hdac4Q6NZM9 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.71■□□□□ 0.59
Hdac4Q6NZM9 Gm7889-201ENSMUST00000185591 958 ntBASIC18.71■□□□□ 0.59
Hdac4Q6NZM9 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms