Protein–RNA interactions for Protein: Q6DID3

Scaf8, Protein SCAF8, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf8Q6DID3 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scaf8Q6DID3 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scaf8Q6DID3 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC19.56■□□□□ 0.72
Scaf8Q6DID3 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC19.56■□□□□ 0.72
Scaf8Q6DID3 Gm7230-201ENSMUST00000173026 815 ntBASIC19.56■□□□□ 0.72
Scaf8Q6DID3 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC19.56■□□□□ 0.72
Scaf8Q6DID3 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Scaf8Q6DID3 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scaf8Q6DID3 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Scaf8Q6DID3 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Scaf8Q6DID3 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Scaf8Q6DID3 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scaf8Q6DID3 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Scaf8Q6DID3 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scaf8Q6DID3 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scaf8Q6DID3 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Scaf8Q6DID3 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Scaf8Q6DID3 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.55■□□□□ 0.72
Scaf8Q6DID3 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC19.55■□□□□ 0.72
Scaf8Q6DID3 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Scaf8Q6DID3 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC19.55■□□□□ 0.72
Scaf8Q6DID3 Rbfox2-207ENSMUST00000227533 1041 ntBASIC19.55■□□□□ 0.72
Scaf8Q6DID3 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Scaf8Q6DID3 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Scaf8Q6DID3 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scaf8Q6DID3 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scaf8Q6DID3 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scaf8Q6DID3 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scaf8Q6DID3 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Scaf8Q6DID3 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scaf8Q6DID3 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scaf8Q6DID3 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scaf8Q6DID3 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scaf8Q6DID3 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scaf8Q6DID3 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scaf8Q6DID3 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Scaf8Q6DID3 Gm6089-201ENSMUST00000197666 938 ntBASIC19.54■□□□□ 0.72
Scaf8Q6DID3 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC19.54■□□□□ 0.72
Scaf8Q6DID3 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scaf8Q6DID3 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scaf8Q6DID3 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Scaf8Q6DID3 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Scaf8Q6DID3 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scaf8Q6DID3 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Scaf8Q6DID3 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC19.54■□□□□ 0.72
Scaf8Q6DID3 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scaf8Q6DID3 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC19.53■□□□□ 0.72
Scaf8Q6DID3 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Scaf8Q6DID3 Zfp264-201ENSMUST00000208656 1563 ntBASIC19.53■□□□□ 0.72
Scaf8Q6DID3 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scaf8Q6DID3 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scaf8Q6DID3 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scaf8Q6DID3 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scaf8Q6DID3 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC19.53■□□□□ 0.72
Scaf8Q6DID3 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC19.53■□□□□ 0.72
Scaf8Q6DID3 Gm27628-201ENSMUST00000184911 107 ntBASIC19.53■□□□□ 0.72
Scaf8Q6DID3 Gm43935-201ENSMUST00000203569 1050 ntBASIC19.53■□□□□ 0.72
Scaf8Q6DID3 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scaf8Q6DID3 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scaf8Q6DID3 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scaf8Q6DID3 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Scaf8Q6DID3 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scaf8Q6DID3 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scaf8Q6DID3 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Scaf8Q6DID3 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Scaf8Q6DID3 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC19.52■□□□□ 0.72
Scaf8Q6DID3 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scaf8Q6DID3 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scaf8Q6DID3 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scaf8Q6DID3 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Scaf8Q6DID3 Gm14140-201ENSMUST00000119999 995 ntBASIC19.52■□□□□ 0.72
Scaf8Q6DID3 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC19.52■□□□□ 0.72
Scaf8Q6DID3 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC19.52■□□□□ 0.72
Scaf8Q6DID3 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC19.52■□□□□ 0.72
Scaf8Q6DID3 Gm4535-201ENSMUST00000182274 558 ntBASIC19.52■□□□□ 0.72
Scaf8Q6DID3 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scaf8Q6DID3 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scaf8Q6DID3 Gm10355-201ENSMUST00000097146 517 ntBASIC19.52■□□□□ 0.72
Scaf8Q6DID3 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scaf8Q6DID3 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scaf8Q6DID3 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Scaf8Q6DID3 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC19.52■□□□□ 0.71
Scaf8Q6DID3 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.71
Scaf8Q6DID3 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Scaf8Q6DID3 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scaf8Q6DID3 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scaf8Q6DID3 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scaf8Q6DID3 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Scaf8Q6DID3 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scaf8Q6DID3 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scaf8Q6DID3 Gm25911-201ENSMUST00000157621 56 ntBASIC19.51■□□□□ 0.71
Scaf8Q6DID3 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC19.51■□□□□ 0.71
Scaf8Q6DID3 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Scaf8Q6DID3 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC19.51■□□□□ 0.71
Scaf8Q6DID3 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Scaf8Q6DID3 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scaf8Q6DID3 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Scaf8Q6DID3 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Scaf8Q6DID3 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Scaf8Q6DID3 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms