Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.83■□□□□ 0.12
AtmQ62388 Gm27000-201ENSMUST00000182943 842 ntBASIC15.83■□□□□ 0.12
AtmQ62388 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AtmQ62388 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AtmQ62388 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
AtmQ62388 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AtmQ62388 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AtmQ62388 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AtmQ62388 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC15.82■□□□□ 0.12
AtmQ62388 Gm37171-201ENSMUST00000192636 1185 ntBASIC15.82■□□□□ 0.12
AtmQ62388 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.82■□□□□ 0.12
AtmQ62388 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AtmQ62388 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AtmQ62388 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
AtmQ62388 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AtmQ62388 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
AtmQ62388 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
AtmQ62388 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
AtmQ62388 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC15.82■□□□□ 0.12
AtmQ62388 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
AtmQ62388 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
AtmQ62388 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
AtmQ62388 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AtmQ62388 Ndufaf2-202ENSMUST00000223734 556 ntBASIC15.81■□□□□ 0.12
AtmQ62388 Gm15500-202ENSMUST00000071641 1019 ntBASIC15.81■□□□□ 0.12
AtmQ62388 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
AtmQ62388 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
AtmQ62388 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
AtmQ62388 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
AtmQ62388 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
AtmQ62388 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AtmQ62388 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
AtmQ62388 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AtmQ62388 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
AtmQ62388 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
AtmQ62388 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
AtmQ62388 AC139382.1-201ENSMUST00000221402 498 ntBASIC15.81■□□□□ 0.12
AtmQ62388 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AtmQ62388 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.81■□□□□ 0.12
AtmQ62388 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.81■□□□□ 0.12
AtmQ62388 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
AtmQ62388 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AtmQ62388 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
AtmQ62388 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.81■□□□□ 0.12
AtmQ62388 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AtmQ62388 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AtmQ62388 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
AtmQ62388 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
AtmQ62388 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
AtmQ62388 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AtmQ62388 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
AtmQ62388 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC15.8■□□□□ 0.12
AtmQ62388 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AtmQ62388 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
AtmQ62388 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
AtmQ62388 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
AtmQ62388 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.8■□□□□ 0.12
AtmQ62388 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
AtmQ62388 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
AtmQ62388 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
AtmQ62388 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.8■□□□□ 0.12
AtmQ62388 Gm23547-201ENSMUST00000158210 271 ntBASIC15.8■□□□□ 0.12
AtmQ62388 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
AtmQ62388 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
AtmQ62388 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
AtmQ62388 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
AtmQ62388 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.79■□□□□ 0.12
AtmQ62388 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.79■□□□□ 0.12
AtmQ62388 Gm20949-201ENSMUST00000206478 952 ntBASIC15.79■□□□□ 0.12
AtmQ62388 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.79■□□□□ 0.12
AtmQ62388 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AtmQ62388 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
AtmQ62388 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
AtmQ62388 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AtmQ62388 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AtmQ62388 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
AtmQ62388 Gm4913-201ENSMUST00000117075 1290 ntBASIC15.79■□□□□ 0.12
AtmQ62388 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AtmQ62388 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
AtmQ62388 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AtmQ62388 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AtmQ62388 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AtmQ62388 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
AtmQ62388 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.79■□□□□ 0.12
AtmQ62388 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.79■□□□□ 0.12
AtmQ62388 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
AtmQ62388 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
AtmQ62388 Gm11780-201ENSMUST00000136880 516 ntBASIC15.79■□□□□ 0.12
AtmQ62388 Mir8112-201ENSMUST00000184382 131 ntBASIC15.79■□□□□ 0.12
AtmQ62388 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
AtmQ62388 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
AtmQ62388 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AtmQ62388 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
AtmQ62388 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
AtmQ62388 Arhgef33-209ENSMUST00000225223 714 ntBASIC15.78■□□□□ 0.12
AtmQ62388 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC15.78■□□□□ 0.12
AtmQ62388 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
AtmQ62388 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
AtmQ62388 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
AtmQ62388 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms