Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.39■□□□□ 0.21
Six3Q62233 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Six3Q62233 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Six3Q62233 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Six3Q62233 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.39■□□□□ 0.21
Six3Q62233 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Six3Q62233 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Six3Q62233 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.39■□□□□ 0.21
Six3Q62233 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.39■□□□□ 0.21
Six3Q62233 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.39■□□□□ 0.21
Six3Q62233 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Six3Q62233 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Six3Q62233 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Six3Q62233 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Six3Q62233 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Six3Q62233 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Six3Q62233 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Six3Q62233 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Six3Q62233 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Six3Q62233 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Six3Q62233 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Six3Q62233 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Six3Q62233 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.38■□□□□ 0.21
Six3Q62233 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Six3Q62233 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Six3Q62233 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Six3Q62233 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Six3Q62233 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.38■□□□□ 0.21
Six3Q62233 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.38■□□□□ 0.21
Six3Q62233 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.38■□□□□ 0.21
Six3Q62233 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC16.38■□□□□ 0.21
Six3Q62233 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.38■□□□□ 0.21
Six3Q62233 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.38■□□□□ 0.21
Six3Q62233 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Six3Q62233 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Six3Q62233 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Six3Q62233 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Six3Q62233 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.38■□□□□ 0.21
Six3Q62233 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Six3Q62233 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Six3Q62233 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Six3Q62233 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Six3Q62233 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Six3Q62233 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Six3Q62233 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Six3Q62233 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Six3Q62233 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Six3Q62233 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Six3Q62233 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Six3Q62233 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Six3Q62233 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.37■□□□□ 0.21
Six3Q62233 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Six3Q62233 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Six3Q62233 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Six3Q62233 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.37■□□□□ 0.21
Six3Q62233 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.37■□□□□ 0.21
Six3Q62233 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Six3Q62233 Il3ra-202ENSMUST00000223589 738 ntBASIC16.37■□□□□ 0.21
Six3Q62233 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Six3Q62233 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Six3Q62233 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Six3Q62233 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Six3Q62233 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Six3Q62233 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Six3Q62233 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Six3Q62233 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Six3Q62233 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Six3Q62233 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Six3Q62233 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Six3Q62233 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Six3Q62233 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Six3Q62233 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Six3Q62233 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Six3Q62233 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Six3Q62233 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.36■□□□□ 0.21
Six3Q62233 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Six3Q62233 Gm8520-201ENSMUST00000186517 868 ntBASIC16.36■□□□□ 0.21
Six3Q62233 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.36■□□□□ 0.21
Six3Q62233 Gm7791-201ENSMUST00000219066 539 ntBASIC16.36■□□□□ 0.21
Six3Q62233 Timm23-208ENSMUST00000226683 750 ntBASIC16.36■□□□□ 0.21
Six3Q62233 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Six3Q62233 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Six3Q62233 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Six3Q62233 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Six3Q62233 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.36■□□□□ 0.21
Six3Q62233 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Six3Q62233 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Six3Q62233 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Six3Q62233 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Six3Q62233 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Six3Q62233 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.35■□□□□ 0.21
Six3Q62233 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Six3Q62233 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.35■□□□□ 0.21
Six3Q62233 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
Six3Q62233 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Six3Q62233 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Six3Q62233 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Six3Q62233 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Six3Q62233 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Six3Q62233 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms