Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.88■□□□□ 0.45
Six2Q62232 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
Six2Q62232 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Six2Q62232 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Six2Q62232 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Six2Q62232 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Six2Q62232 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Six2Q62232 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Six2Q62232 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Six2Q62232 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Six2Q62232 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Six2Q62232 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Six2Q62232 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Six2Q62232 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Six2Q62232 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.87■□□□□ 0.45
Six2Q62232 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.87■□□□□ 0.45
Six2Q62232 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.87■□□□□ 0.45
Six2Q62232 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.87■□□□□ 0.45
Six2Q62232 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Six2Q62232 Gm10566-201ENSMUST00000086739 996 ntBASIC17.87■□□□□ 0.45
Six2Q62232 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Six2Q62232 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.87■□□□□ 0.45
Six2Q62232 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Six2Q62232 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Six2Q62232 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Six2Q62232 Actl10-202ENSMUST00000226583 1501 ntBASIC17.87■□□□□ 0.45
Six2Q62232 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Six2Q62232 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Six2Q62232 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Six2Q62232 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Six2Q62232 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
Six2Q62232 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Six2Q62232 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Six2Q62232 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Six2Q62232 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.86■□□□□ 0.45
Six2Q62232 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Six2Q62232 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Six2Q62232 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Six2Q62232 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.86■□□□□ 0.45
Six2Q62232 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Six2Q62232 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Six2Q62232 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Six2Q62232 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Six2Q62232 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.85■□□□□ 0.45
Six2Q62232 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.85■□□□□ 0.45
Six2Q62232 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.85■□□□□ 0.45
Six2Q62232 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Six2Q62232 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.85■□□□□ 0.45
Six2Q62232 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.85■□□□□ 0.45
Six2Q62232 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Six2Q62232 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Six2Q62232 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Six2Q62232 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Six2Q62232 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Six2Q62232 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Six2Q62232 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Six2Q62232 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Six2Q62232 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Six2Q62232 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.84■□□□□ 0.45
Six2Q62232 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Six2Q62232 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Six2Q62232 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Six2Q62232 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Six2Q62232 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Six2Q62232 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Six2Q62232 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Six2Q62232 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Six2Q62232 Gm2274-201ENSMUST00000184539 609 ntBASIC17.84■□□□□ 0.45
Six2Q62232 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.84■□□□□ 0.45
Six2Q62232 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.84■□□□□ 0.45
Six2Q62232 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Six2Q62232 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Six2Q62232 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Six2Q62232 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Six2Q62232 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Six2Q62232 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Six2Q62232 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Six2Q62232 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Six2Q62232 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Six2Q62232 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Six2Q62232 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Six2Q62232 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Six2Q62232 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Six2Q62232 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Six2Q62232 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Six2Q62232 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Six2Q62232 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Six2Q62232 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.83■□□□□ 0.44
Six2Q62232 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Six2Q62232 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Six2Q62232 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Six2Q62232 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Six2Q62232 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Six2Q62232 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Six2Q62232 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Six2Q62232 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Six2Q62232 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Six2Q62232 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Six2Q62232 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Six2Q62232 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms