Protein–RNA interactions for Protein: Q62209

Sycp1, Synaptonemal complex protein 1, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sycp1Q62209 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sycp1Q62209 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sycp1Q62209 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sycp1Q62209 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Sycp1Q62209 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sycp1Q62209 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sycp1Q62209 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC18.81■□□□□ 0.6
Sycp1Q62209 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sycp1Q62209 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.81■□□□□ 0.6
Sycp1Q62209 Gm9731-201ENSMUST00000209480 747 ntBASIC18.81■□□□□ 0.6
Sycp1Q62209 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sycp1Q62209 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sycp1Q62209 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.81■□□□□ 0.6
Sycp1Q62209 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sycp1Q62209 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Sycp1Q62209 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sycp1Q62209 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sycp1Q62209 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sycp1Q62209 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sycp1Q62209 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sycp1Q62209 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.8■□□□□ 0.6
Sycp1Q62209 Gm27463-201ENSMUST00000183569 57 ntBASIC18.8■□□□□ 0.6
Sycp1Q62209 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.8■□□□□ 0.6
Sycp1Q62209 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.8■□□□□ 0.6
Sycp1Q62209 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sycp1Q62209 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sycp1Q62209 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sycp1Q62209 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sycp1Q62209 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sycp1Q62209 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Sycp1Q62209 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sycp1Q62209 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sycp1Q62209 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.79■□□□□ 0.6
Sycp1Q62209 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.79■□□□□ 0.6
Sycp1Q62209 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
Sycp1Q62209 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sycp1Q62209 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sycp1Q62209 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.79■□□□□ 0.6
Sycp1Q62209 Gm11539-201ENSMUST00000119837 557 ntBASIC18.79■□□□□ 0.6
Sycp1Q62209 Gm13436-201ENSMUST00000120418 567 ntBASIC18.79■□□□□ 0.6
Sycp1Q62209 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sycp1Q62209 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sycp1Q62209 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sycp1Q62209 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sycp1Q62209 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sycp1Q62209 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.79■□□□□ 0.6
Sycp1Q62209 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sycp1Q62209 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sycp1Q62209 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sycp1Q62209 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Sycp1Q62209 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sycp1Q62209 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sycp1Q62209 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Sycp1Q62209 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sycp1Q62209 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sycp1Q62209 Gm17661-201ENSMUST00000170317 270 ntBASIC18.78■□□□□ 0.6
Sycp1Q62209 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Sycp1Q62209 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sycp1Q62209 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sycp1Q62209 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sycp1Q62209 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Sycp1Q62209 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sycp1Q62209 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sycp1Q62209 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sycp1Q62209 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sycp1Q62209 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sycp1Q62209 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.77■□□□□ 0.6
Sycp1Q62209 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC18.77■□□□□ 0.6
Sycp1Q62209 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sycp1Q62209 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sycp1Q62209 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC18.77■□□□□ 0.6
Sycp1Q62209 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.77■□□□□ 0.6
Sycp1Q62209 Gm43799-201ENSMUST00000201845 579 ntBASIC18.77■□□□□ 0.6
Sycp1Q62209 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sycp1Q62209 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.77■□□□□ 0.6
Sycp1Q62209 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sycp1Q62209 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Sycp1Q62209 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sycp1Q62209 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Sycp1Q62209 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sycp1Q62209 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Sycp1Q62209 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sycp1Q62209 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sycp1Q62209 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sycp1Q62209 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.59
Sycp1Q62209 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sycp1Q62209 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sycp1Q62209 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sycp1Q62209 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Sycp1Q62209 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sycp1Q62209 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sycp1Q62209 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Sycp1Q62209 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Sycp1Q62209 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sycp1Q62209 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sycp1Q62209 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sycp1Q62209 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sycp1Q62209 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sycp1Q62209 Krtap5-1-202ENSMUST00000188274 742 ntBASIC18.76■□□□□ 0.59
Sycp1Q62209 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms