Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn9aQ62205 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn9aQ62205 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn9aQ62205 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Scn9aQ62205 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn9aQ62205 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn9aQ62205 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC19.73■□□□□ 0.75
Scn9aQ62205 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn9aQ62205 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn9aQ62205 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Scn9aQ62205 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn9aQ62205 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Scn9aQ62205 Gm43808-201ENSMUST00000202534 2065 ntBASIC19.73■□□□□ 0.75
Scn9aQ62205 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn9aQ62205 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn9aQ62205 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Scn9aQ62205 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn9aQ62205 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn9aQ62205 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Scn9aQ62205 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC19.72■□□□□ 0.75
Scn9aQ62205 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn9aQ62205 AC122901.1-201ENSMUST00000214203 1790 ntBASIC19.72■□□□□ 0.75
Scn9aQ62205 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn9aQ62205 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn9aQ62205 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn9aQ62205 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn9aQ62205 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn9aQ62205 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Scn9aQ62205 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn9aQ62205 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Scn9aQ62205 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.72■□□□□ 0.75
Scn9aQ62205 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn9aQ62205 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn9aQ62205 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Scn9aQ62205 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scn9aQ62205 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scn9aQ62205 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC19.71■□□□□ 0.75
Scn9aQ62205 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Scn9aQ62205 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Scn9aQ62205 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Scn9aQ62205 Gm6089-201ENSMUST00000197666 938 ntBASIC19.71■□□□□ 0.75
Scn9aQ62205 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC19.71■□□□□ 0.75
Scn9aQ62205 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scn9aQ62205 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Scn9aQ62205 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn9aQ62205 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Scn9aQ62205 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn9aQ62205 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Scn9aQ62205 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn9aQ62205 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC19.7■□□□□ 0.74
Scn9aQ62205 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn9aQ62205 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn9aQ62205 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Scn9aQ62205 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Scn9aQ62205 Gm12497-201ENSMUST00000138778 237 ntBASIC19.7■□□□□ 0.74
Scn9aQ62205 Gm37584-201ENSMUST00000193595 1290 ntBASIC19.7■□□□□ 0.74
Scn9aQ62205 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Scn9aQ62205 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn9aQ62205 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn9aQ62205 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn9aQ62205 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Scn9aQ62205 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC19.69■□□□□ 0.74
Scn9aQ62205 Gm45683-201ENSMUST00000210825 1247 ntBASIC19.69■□□□□ 0.74
Scn9aQ62205 Bloc1s5-203ENSMUST00000224902 612 ntBASIC19.69■□□□□ 0.74
Scn9aQ62205 AC154757.1-201ENSMUST00000228289 336 ntBASIC19.69■□□□□ 0.74
Scn9aQ62205 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Scn9aQ62205 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.69■□□□□ 0.74
Scn9aQ62205 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn9aQ62205 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.69■□□□□ 0.74
Scn9aQ62205 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Scn9aQ62205 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn9aQ62205 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn9aQ62205 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn9aQ62205 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.68■□□□□ 0.74
Scn9aQ62205 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn9aQ62205 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn9aQ62205 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Scn9aQ62205 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn9aQ62205 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn9aQ62205 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn9aQ62205 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn9aQ62205 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn9aQ62205 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn9aQ62205 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn9aQ62205 Gm6184-201ENSMUST00000120403 1261 ntBASIC19.68■□□□□ 0.74
Scn9aQ62205 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Scn9aQ62205 AC151286.1-201ENSMUST00000198489 145 ntBASIC19.68■□□□□ 0.74
Scn9aQ62205 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC19.68■□□□□ 0.74
Scn9aQ62205 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn9aQ62205 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Scn9aQ62205 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Scn9aQ62205 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Scn9aQ62205 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn9aQ62205 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn9aQ62205 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.67■□□□□ 0.74
Scn9aQ62205 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Scn9aQ62205 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC19.67■□□□□ 0.74
Scn9aQ62205 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Scn9aQ62205 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Scn9aQ62205 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms