Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC20.6■□□□□ 0.89
Trim27Q62158 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim27Q62158 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trim27Q62158 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim27Q62158 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim27Q62158 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Trim27Q62158 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC20.59■□□□□ 0.89
Trim27Q62158 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trim27Q62158 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC20.59■□□□□ 0.89
Trim27Q62158 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim27Q62158 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
Trim27Q62158 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim27Q62158 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim27Q62158 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim27Q62158 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Trim27Q62158 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Trim27Q62158 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Trim27Q62158 Gm6433-201ENSMUST00000118634 875 ntBASIC20.59■□□□□ 0.89
Trim27Q62158 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Trim27Q62158 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC20.59■□□□□ 0.89
Trim27Q62158 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim27Q62158 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trim27Q62158 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Trim27Q62158 Gm18959-201ENSMUST00000208954 655 ntBASIC20.59■□□□□ 0.89
Trim27Q62158 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim27Q62158 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim27Q62158 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trim27Q62158 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim27Q62158 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Trim27Q62158 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim27Q62158 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.58■□□□□ 0.89
Trim27Q62158 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Trim27Q62158 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim27Q62158 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim27Q62158 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim27Q62158 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim27Q62158 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim27Q62158 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim27Q62158 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim27Q62158 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim27Q62158 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Trim27Q62158 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC20.58■□□□□ 0.89
Trim27Q62158 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC20.58■□□□□ 0.89
Trim27Q62158 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC20.58■□□□□ 0.89
Trim27Q62158 Gm44450-201ENSMUST00000199528 114 ntBASIC20.58■□□□□ 0.89
Trim27Q62158 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim27Q62158 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Trim27Q62158 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim27Q62158 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim27Q62158 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Trim27Q62158 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim27Q62158 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim27Q62158 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim27Q62158 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Trim27Q62158 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trim27Q62158 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim27Q62158 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC20.57■□□□□ 0.88
Trim27Q62158 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Trim27Q62158 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim27Q62158 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim27Q62158 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC20.57■□□□□ 0.88
Trim27Q62158 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC20.57■□□□□ 0.88
Trim27Q62158 Mir1668-201ENSMUST00000184114 107 ntBASIC20.57■□□□□ 0.88
Trim27Q62158 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Trim27Q62158 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC20.57■□□□□ 0.88
Trim27Q62158 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim27Q62158 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim27Q62158 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Trim27Q62158 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
Trim27Q62158 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Trim27Q62158 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim27Q62158 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Trim27Q62158 Gm28265-201ENSMUST00000188201 2319 ntBASIC20.56■□□□□ 0.88
Trim27Q62158 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Trim27Q62158 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim27Q62158 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trim27Q62158 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim27Q62158 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Trim27Q62158 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trim27Q62158 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
Trim27Q62158 Gm18115-201ENSMUST00000221209 621 ntBASIC20.56■□□□□ 0.88
Trim27Q62158 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim27Q62158 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trim27Q62158 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim27Q62158 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC20.56■□□□□ 0.88
Trim27Q62158 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim27Q62158 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim27Q62158 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim27Q62158 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim27Q62158 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim27Q62158 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim27Q62158 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim27Q62158 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim27Q62158 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim27Q62158 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim27Q62158 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim27Q62158 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Trim27Q62158 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim27Q62158 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim27Q62158 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms