Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VcanQ62059 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.73■□□□□ 0.11
VcanQ62059 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
VcanQ62059 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VcanQ62059 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
VcanQ62059 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
VcanQ62059 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
VcanQ62059 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
VcanQ62059 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
VcanQ62059 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
VcanQ62059 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC15.72■□□□□ 0.11
VcanQ62059 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VcanQ62059 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
VcanQ62059 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VcanQ62059 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VcanQ62059 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
VcanQ62059 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.72■□□□□ 0.11
VcanQ62059 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VcanQ62059 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
VcanQ62059 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VcanQ62059 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VcanQ62059 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
VcanQ62059 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
VcanQ62059 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
VcanQ62059 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
VcanQ62059 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
VcanQ62059 BC021767-201ENSMUST00000126387 1716 ntBASIC15.71■□□□□ 0.11
VcanQ62059 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
VcanQ62059 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.71■□□□□ 0.11
VcanQ62059 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC15.71■□□□□ 0.11
VcanQ62059 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VcanQ62059 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
VcanQ62059 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VcanQ62059 Gm12428-201ENSMUST00000119844 727 ntBASIC15.71■□□□□ 0.11
VcanQ62059 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.71■□□□□ 0.11
VcanQ62059 H2-Pa-201ENSMUST00000182803 626 ntBASIC15.71■□□□□ 0.11
VcanQ62059 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
VcanQ62059 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VcanQ62059 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
VcanQ62059 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
VcanQ62059 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
VcanQ62059 Gm42939-201ENSMUST00000197514 2205 ntBASIC15.71■□□□□ 0.1
VcanQ62059 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
VcanQ62059 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VcanQ62059 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VcanQ62059 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VcanQ62059 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VcanQ62059 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VcanQ62059 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.7■□□□□ 0.1
VcanQ62059 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.7■□□□□ 0.1
VcanQ62059 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VcanQ62059 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC15.7■□□□□ 0.1
VcanQ62059 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC15.7■□□□□ 0.1
VcanQ62059 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
VcanQ62059 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VcanQ62059 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.7■□□□□ 0.1
VcanQ62059 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC15.7■□□□□ 0.1
VcanQ62059 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VcanQ62059 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VcanQ62059 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC15.7■□□□□ 0.1
VcanQ62059 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VcanQ62059 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC15.69■□□□□ 0.1
VcanQ62059 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
VcanQ62059 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VcanQ62059 Gm11424-201ENSMUST00000121929 829 ntBASIC15.69■□□□□ 0.1
VcanQ62059 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
VcanQ62059 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VcanQ62059 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
VcanQ62059 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VcanQ62059 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VcanQ62059 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VcanQ62059 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VcanQ62059 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC15.69■□□□□ 0.1
VcanQ62059 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VcanQ62059 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
VcanQ62059 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
VcanQ62059 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
VcanQ62059 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC15.69■□□□□ 0.1
VcanQ62059 Gm11764-201ENSMUST00000120221 623 ntBASIC15.69■□□□□ 0.1
VcanQ62059 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VcanQ62059 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.69■□□□□ 0.1
VcanQ62059 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VcanQ62059 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
VcanQ62059 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC15.68■□□□□ 0.1
VcanQ62059 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.68■□□□□ 0.1
VcanQ62059 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VcanQ62059 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VcanQ62059 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VcanQ62059 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
VcanQ62059 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.68■□□□□ 0.1
VcanQ62059 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.68■□□□□ 0.1
VcanQ62059 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VcanQ62059 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VcanQ62059 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VcanQ62059 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VcanQ62059 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VcanQ62059 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.68■□□□□ 0.1
VcanQ62059 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
VcanQ62059 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VcanQ62059 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms