Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Notch3Q61982 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Notch3Q61982 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Notch3Q61982 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Notch3Q61982 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Notch3Q61982 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Notch3Q61982 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Notch3Q61982 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Notch3Q61982 Actl10-202ENSMUST00000226583 1501 ntBASIC12.86□□□□□ -0.35
Notch3Q61982 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC12.86□□□□□ -0.35
Notch3Q61982 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Notch3Q61982 Gm11950-201ENSMUST00000121615 838 ntBASIC12.85□□□□□ -0.35
Notch3Q61982 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC12.85□□□□□ -0.35
Notch3Q61982 Otx2os1-206ENSMUST00000228153 787 ntBASIC12.85□□□□□ -0.35
Notch3Q61982 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Notch3Q61982 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Notch3Q61982 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Notch3Q61982 Gm45906-201ENSMUST00000208911 1430 ntBASIC12.85□□□□□ -0.35
Notch3Q61982 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Notch3Q61982 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC12.85□□□□□ -0.35
Notch3Q61982 Gm26039-201ENSMUST00000158152 144 ntBASIC12.85□□□□□ -0.35
Notch3Q61982 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Notch3Q61982 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC12.85□□□□□ -0.35
Notch3Q61982 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Notch3Q61982 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Notch3Q61982 AC164629.2-201ENSMUST00000217916 270 ntBASIC12.85□□□□□ -0.35
Notch3Q61982 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Notch3Q61982 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Notch3Q61982 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Notch3Q61982 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Notch3Q61982 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Notch3Q61982 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Notch3Q61982 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Notch3Q61982 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC12.85□□□□□ -0.35
Notch3Q61982 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Notch3Q61982 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Notch3Q61982 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Notch3Q61982 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Notch3Q61982 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC12.84□□□□□ -0.35
Notch3Q61982 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Notch3Q61982 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC12.84□□□□□ -0.35
Notch3Q61982 Gm9731-201ENSMUST00000209480 747 ntBASIC12.84□□□□□ -0.35
Notch3Q61982 Birc2-201ENSMUST00000054878 378 ntBASIC12.84□□□□□ -0.35
Notch3Q61982 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Notch3Q61982 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Notch3Q61982 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Notch3Q61982 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Notch3Q61982 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Notch3Q61982 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Notch3Q61982 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Notch3Q61982 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Notch3Q61982 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Notch3Q61982 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Notch3Q61982 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC12.84□□□□□ -0.35
Notch3Q61982 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Notch3Q61982 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Notch3Q61982 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Notch3Q61982 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Notch3Q61982 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Notch3Q61982 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Notch3Q61982 AC122335.2-201ENSMUST00000213901 6181 ntBASIC12.84□□□□□ -0.35
Notch3Q61982 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Notch3Q61982 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Notch3Q61982 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Notch3Q61982 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Notch3Q61982 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Notch3Q61982 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Notch3Q61982 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Notch3Q61982 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Notch3Q61982 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Notch3Q61982 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Notch3Q61982 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Notch3Q61982 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Notch3Q61982 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.36
Notch3Q61982 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC12.83□□□□□ -0.36
Notch3Q61982 Gm43514-201ENSMUST00000198852 424 ntBASIC12.83□□□□□ -0.36
Notch3Q61982 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC12.83□□□□□ -0.36
Notch3Q61982 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Notch3Q61982 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Notch3Q61982 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Notch3Q61982 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC12.83□□□□□ -0.36
Notch3Q61982 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Notch3Q61982 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Notch3Q61982 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Notch3Q61982 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Notch3Q61982 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Notch3Q61982 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Notch3Q61982 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Notch3Q61982 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC12.83□□□□□ -0.36
Notch3Q61982 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Notch3Q61982 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Notch3Q61982 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Notch3Q61982 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Notch3Q61982 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Notch3Q61982 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Notch3Q61982 Gm27459-201ENSMUST00000184860 107 ntBASIC12.83□□□□□ -0.36
Notch3Q61982 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC12.83□□□□□ -0.36
Notch3Q61982 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC12.83□□□□□ -0.36
Notch3Q61982 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Notch3Q61982 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms