Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC12.32□□□□□ -0.44
Foxc1Q61572 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Foxc1Q61572 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Foxc1Q61572 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Foxc1Q61572 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Foxc1Q61572 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Foxc1Q61572 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Foxc1Q61572 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Foxc1Q61572 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Foxc1Q61572 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Foxc1Q61572 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Foxc1Q61572 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC12.32□□□□□ -0.44
Foxc1Q61572 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC12.32□□□□□ -0.44
Foxc1Q61572 Gm7889-201ENSMUST00000185591 958 ntBASIC12.32□□□□□ -0.44
Foxc1Q61572 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC12.32□□□□□ -0.44
Foxc1Q61572 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Foxc1Q61572 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Foxc1Q61572 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Foxc1Q61572 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Foxc1Q61572 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Foxc1Q61572 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Foxc1Q61572 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Foxc1Q61572 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Foxc1Q61572 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Foxc1Q61572 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Foxc1Q61572 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Foxc1Q61572 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Foxc1Q61572 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Foxc1Q61572 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Foxc1Q61572 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC12.31□□□□□ -0.44
Foxc1Q61572 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC12.31□□□□□ -0.44
Foxc1Q61572 Gm8668-201ENSMUST00000120559 1447 ntBASIC12.31□□□□□ -0.44
Foxc1Q61572 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Foxc1Q61572 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Foxc1Q61572 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Foxc1Q61572 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Foxc1Q61572 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC12.31□□□□□ -0.44
Foxc1Q61572 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Foxc1Q61572 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Foxc1Q61572 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Foxc1Q61572 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC12.31□□□□□ -0.44
Foxc1Q61572 Gm11539-201ENSMUST00000119837 557 ntBASIC12.31□□□□□ -0.44
Foxc1Q61572 Gm13436-201ENSMUST00000120418 567 ntBASIC12.31□□□□□ -0.44
Foxc1Q61572 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Foxc1Q61572 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Foxc1Q61572 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.31□□□□□ -0.44
Foxc1Q61572 Gm18515-201ENSMUST00000219755 797 ntBASIC12.31□□□□□ -0.44
Foxc1Q61572 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Foxc1Q61572 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Foxc1Q61572 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Foxc1Q61572 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Foxc1Q61572 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Foxc1Q61572 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Foxc1Q61572 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Foxc1Q61572 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Foxc1Q61572 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Foxc1Q61572 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Foxc1Q61572 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Foxc1Q61572 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxc1Q61572 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxc1Q61572 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxc1Q61572 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.3□□□□□ -0.44
Foxc1Q61572 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxc1Q61572 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Foxc1Q61572 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxc1Q61572 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Foxc1Q61572 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxc1Q61572 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxc1Q61572 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxc1Q61572 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Foxc1Q61572 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxc1Q61572 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Foxc1Q61572 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Foxc1Q61572 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Foxc1Q61572 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Foxc1Q61572 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC12.3□□□□□ -0.44
Foxc1Q61572 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxc1Q61572 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC12.3□□□□□ -0.44
Foxc1Q61572 Gm44044-201ENSMUST00000205178 1089 ntBASIC12.3□□□□□ -0.44
Foxc1Q61572 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC12.3□□□□□ -0.44
Foxc1Q61572 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxc1Q61572 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxc1Q61572 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxc1Q61572 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Foxc1Q61572 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxc1Q61572 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxc1Q61572 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxc1Q61572 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC12.3□□□□□ -0.44
Foxc1Q61572 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxc1Q61572 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxc1Q61572 Gm42918-201ENSMUST00000199249 1580 ntBASIC12.3□□□□□ -0.44
Foxc1Q61572 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxc1Q61572 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxc1Q61572 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxc1Q61572 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxc1Q61572 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxc1Q61572 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxc1Q61572 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Foxc1Q61572 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Foxc1Q61572 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms