Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox17Q61473 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox17Q61473 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC15.78■□□□□ 0.12
Sox17Q61473 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox17Q61473 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Sox17Q61473 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox17Q61473 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox17Q61473 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Sox17Q61473 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox17Q61473 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox17Q61473 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Sox17Q61473 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox17Q61473 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox17Q61473 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox17Q61473 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox17Q61473 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox17Q61473 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC15.78■□□□□ 0.12
Sox17Q61473 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sox17Q61473 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sox17Q61473 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sox17Q61473 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sox17Q61473 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sox17Q61473 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC15.77■□□□□ 0.12
Sox17Q61473 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.77■□□□□ 0.12
Sox17Q61473 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sox17Q61473 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sox17Q61473 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sox17Q61473 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sox17Q61473 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sox17Q61473 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sox17Q61473 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sox17Q61473 Gm11643-201ENSMUST00000119578 864 ntBASIC15.77■□□□□ 0.12
Sox17Q61473 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC15.77■□□□□ 0.12
Sox17Q61473 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.77■□□□□ 0.12
Sox17Q61473 Gm26524-201ENSMUST00000192339 390 ntBASIC15.77■□□□□ 0.12
Sox17Q61473 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sox17Q61473 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sox17Q61473 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.77■□□□□ 0.11
Sox17Q61473 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sox17Q61473 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
Sox17Q61473 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sox17Q61473 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Sox17Q61473 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sox17Q61473 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sox17Q61473 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sox17Q61473 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox17Q61473 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox17Q61473 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox17Q61473 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC15.76■□□□□ 0.11
Sox17Q61473 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC15.76■□□□□ 0.11
Sox17Q61473 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Sox17Q61473 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox17Q61473 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Sox17Q61473 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Sox17Q61473 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox17Q61473 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC15.76■□□□□ 0.11
Sox17Q61473 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox17Q61473 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Sox17Q61473 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox17Q61473 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox17Q61473 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox17Q61473 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Sox17Q61473 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox17Q61473 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Sox17Q61473 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox17Q61473 Gm13148-201ENSMUST00000118892 745 ntBASIC15.75■□□□□ 0.11
Sox17Q61473 Gm15847-201ENSMUST00000121417 1065 ntBASIC15.75■□□□□ 0.11
Sox17Q61473 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Sox17Q61473 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Sox17Q61473 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Sox17Q61473 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Sox17Q61473 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox17Q61473 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox17Q61473 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Sox17Q61473 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox17Q61473 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.75■□□□□ 0.11
Sox17Q61473 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Sox17Q61473 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Sox17Q61473 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Sox17Q61473 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.75■□□□□ 0.11
Sox17Q61473 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox17Q61473 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox17Q61473 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Sox17Q61473 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Sox17Q61473 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox17Q61473 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox17Q61473 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox17Q61473 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox17Q61473 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox17Q61473 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox17Q61473 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox17Q61473 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox17Q61473 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox17Q61473 Gm7290-201ENSMUST00000104990 617 ntBASIC15.74■□□□□ 0.11
Sox17Q61473 Gm12918-201ENSMUST00000120234 636 ntBASIC15.74■□□□□ 0.11
Sox17Q61473 Gm15710-201ENSMUST00000121821 636 ntBASIC15.74■□□□□ 0.11
Sox17Q61473 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Sox17Q61473 Gm5075-201ENSMUST00000196916 622 ntBASIC15.74■□□□□ 0.11
Sox17Q61473 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Sox17Q61473 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms