Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Scnn1aQ61180 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Scnn1aQ61180 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scnn1aQ61180 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scnn1aQ61180 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scnn1aQ61180 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scnn1aQ61180 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.27■□□□□ 0.68
Scnn1aQ61180 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Scnn1aQ61180 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scnn1aQ61180 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scnn1aQ61180 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC19.27■□□□□ 0.68
Scnn1aQ61180 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC19.27■□□□□ 0.68
Scnn1aQ61180 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scnn1aQ61180 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scnn1aQ61180 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Scnn1aQ61180 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Scnn1aQ61180 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Scnn1aQ61180 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Scnn1aQ61180 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Scnn1aQ61180 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Scnn1aQ61180 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Scnn1aQ61180 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.26■□□□□ 0.67
Scnn1aQ61180 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scnn1aQ61180 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.26■□□□□ 0.67
Scnn1aQ61180 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Scnn1aQ61180 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Scnn1aQ61180 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC19.26■□□□□ 0.67
Scnn1aQ61180 Gm13312-201ENSMUST00000119631 718 ntBASIC19.26■□□□□ 0.67
Scnn1aQ61180 Gm15372-201ENSMUST00000120729 834 ntBASIC19.26■□□□□ 0.67
Scnn1aQ61180 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC19.26■□□□□ 0.67
Scnn1aQ61180 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scnn1aQ61180 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scnn1aQ61180 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scnn1aQ61180 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scnn1aQ61180 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Scnn1aQ61180 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scnn1aQ61180 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.26■□□□□ 0.67
Scnn1aQ61180 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Scnn1aQ61180 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scnn1aQ61180 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scnn1aQ61180 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Scnn1aQ61180 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scnn1aQ61180 Gm15442-201ENSMUST00000117905 1527 ntBASIC19.25■□□□□ 0.67
Scnn1aQ61180 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Scnn1aQ61180 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Scnn1aQ61180 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scnn1aQ61180 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scnn1aQ61180 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Scnn1aQ61180 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scnn1aQ61180 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Scnn1aQ61180 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scnn1aQ61180 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC19.25■□□□□ 0.67
Scnn1aQ61180 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC19.25■□□□□ 0.67
Scnn1aQ61180 Birc2-201ENSMUST00000054878 378 ntBASIC19.25■□□□□ 0.67
Scnn1aQ61180 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Scnn1aQ61180 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Scnn1aQ61180 Rarb-207ENSMUST00000225921 2756 ntBASIC19.25■□□□□ 0.67
Scnn1aQ61180 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scnn1aQ61180 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Scnn1aQ61180 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
Scnn1aQ61180 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Scnn1aQ61180 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scnn1aQ61180 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scnn1aQ61180 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.24■□□□□ 0.67
Scnn1aQ61180 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Scnn1aQ61180 AC153794.1-201ENSMUST00000169148 126 ntBASIC19.24■□□□□ 0.67
Scnn1aQ61180 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
Scnn1aQ61180 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC19.24■□□□□ 0.67
Scnn1aQ61180 Gm44487-201ENSMUST00000205145 325 ntBASIC19.24■□□□□ 0.67
Scnn1aQ61180 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Scnn1aQ61180 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Scnn1aQ61180 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scnn1aQ61180 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Scnn1aQ61180 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scnn1aQ61180 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scnn1aQ61180 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Scnn1aQ61180 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Scnn1aQ61180 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scnn1aQ61180 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC19.23■□□□□ 0.67
Scnn1aQ61180 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Scnn1aQ61180 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scnn1aQ61180 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Scnn1aQ61180 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scnn1aQ61180 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Scnn1aQ61180 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scnn1aQ61180 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scnn1aQ61180 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Scnn1aQ61180 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Scnn1aQ61180 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC19.22■□□□□ 0.67
Scnn1aQ61180 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scnn1aQ61180 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scnn1aQ61180 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scnn1aQ61180 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC19.22■□□□□ 0.67
Scnn1aQ61180 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Scnn1aQ61180 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Scnn1aQ61180 Rprl3-201ENSMUST00000157400 290 ntBASIC19.22■□□□□ 0.67
Scnn1aQ61180 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
Scnn1aQ61180 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
Scnn1aQ61180 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
Scnn1aQ61180 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms