Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.36■□□□□ 0.53
Cln3Q61124 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC18.36■□□□□ 0.53
Cln3Q61124 Gm13830-205ENSMUST00000201195 1155 ntBASIC18.36■□□□□ 0.53
Cln3Q61124 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cln3Q61124 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cln3Q61124 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cln3Q61124 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cln3Q61124 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cln3Q61124 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cln3Q61124 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cln3Q61124 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.35■□□□□ 0.53
Cln3Q61124 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cln3Q61124 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cln3Q61124 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.35■□□□□ 0.53
Cln3Q61124 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cln3Q61124 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC18.35■□□□□ 0.53
Cln3Q61124 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC18.35■□□□□ 0.53
Cln3Q61124 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cln3Q61124 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cln3Q61124 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Cln3Q61124 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cln3Q61124 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cln3Q61124 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cln3Q61124 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cln3Q61124 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cln3Q61124 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18.35■□□□□ 0.53
Cln3Q61124 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cln3Q61124 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cln3Q61124 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cln3Q61124 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC18.34■□□□□ 0.53
Cln3Q61124 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC18.34■□□□□ 0.53
Cln3Q61124 Vti1a-206ENSMUST00000225529 1244 ntBASIC18.34■□□□□ 0.53
Cln3Q61124 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cln3Q61124 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Cln3Q61124 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cln3Q61124 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.34■□□□□ 0.53
Cln3Q61124 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cln3Q61124 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Cln3Q61124 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cln3Q61124 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Cln3Q61124 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Cln3Q61124 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Cln3Q61124 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.33■□□□□ 0.53
Cln3Q61124 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Cln3Q61124 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cln3Q61124 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Cln3Q61124 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cln3Q61124 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Cln3Q61124 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
Cln3Q61124 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cln3Q61124 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cln3Q61124 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cln3Q61124 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cln3Q61124 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Cln3Q61124 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cln3Q61124 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Cln3Q61124 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Cln3Q61124 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cln3Q61124 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cln3Q61124 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
Cln3Q61124 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cln3Q61124 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cln3Q61124 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Cln3Q61124 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cln3Q61124 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cln3Q61124 Gm1401-201ENSMUST00000122048 772 ntBASIC18.32■□□□□ 0.52
Cln3Q61124 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
Cln3Q61124 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC18.32■□□□□ 0.52
Cln3Q61124 Gm8969-201ENSMUST00000199694 526 ntBASIC18.32■□□□□ 0.52
Cln3Q61124 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC18.32■□□□□ 0.52
Cln3Q61124 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cln3Q61124 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cln3Q61124 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.32■□□□□ 0.52
Cln3Q61124 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cln3Q61124 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cln3Q61124 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.31■□□□□ 0.52
Cln3Q61124 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cln3Q61124 Gm18856-201ENSMUST00000178096 1374 ntBASIC18.31■□□□□ 0.52
Cln3Q61124 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cln3Q61124 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Cln3Q61124 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cln3Q61124 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cln3Q61124 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cln3Q61124 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cln3Q61124 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC18.31■□□□□ 0.52
Cln3Q61124 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Cln3Q61124 Gm10060-201ENSMUST00000212002 111 ntBASIC18.31■□□□□ 0.52
Cln3Q61124 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC18.31■□□□□ 0.52
Cln3Q61124 CT009713.7-201ENSMUST00000224689 571 ntBASIC18.31■□□□□ 0.52
Cln3Q61124 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
Cln3Q61124 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC18.31■□□□□ 0.52
Cln3Q61124 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.31■□□□□ 0.52
Cln3Q61124 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cln3Q61124 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Cln3Q61124 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cln3Q61124 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Cln3Q61124 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cln3Q61124 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cln3Q61124 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Cln3Q61124 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms