Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
Ptch1Q61115 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Ptch1Q61115 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC24.15■■□□□ 1.46
Ptch1Q61115 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC24.15■■□□□ 1.46
Ptch1Q61115 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC24.15■■□□□ 1.46
Ptch1Q61115 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC24.15■■□□□ 1.46
Ptch1Q61115 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC24.15■■□□□ 1.46
Ptch1Q61115 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
Ptch1Q61115 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Ptch1Q61115 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Ptch1Q61115 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC24.14■■□□□ 1.45
Ptch1Q61115 AC174742.1-201ENSMUST00000218272 304 ntBASIC24.14■■□□□ 1.45
Ptch1Q61115 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Ptch1Q61115 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC24.14■■□□□ 1.45
Ptch1Q61115 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Ptch1Q61115 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Ptch1Q61115 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
Ptch1Q61115 Gm5837-201ENSMUST00000191844 1369 ntBASIC24.14■■□□□ 1.45
Ptch1Q61115 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
Ptch1Q61115 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Ptch1Q61115 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Ptch1Q61115 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC24.13■■□□□ 1.45
Ptch1Q61115 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Ptch1Q61115 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Ptch1Q61115 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC24.13■■□□□ 1.45
Ptch1Q61115 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Ptch1Q61115 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC24.13■■□□□ 1.45
Ptch1Q61115 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Ptch1Q61115 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Ptch1Q61115 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC24.13■■□□□ 1.45
Ptch1Q61115 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
Ptch1Q61115 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC24.13■■□□□ 1.45
Ptch1Q61115 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
Ptch1Q61115 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Ptch1Q61115 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Ptch1Q61115 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Ptch1Q61115 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Ptch1Q61115 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Ptch1Q61115 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Ptch1Q61115 Gm7229-201ENSMUST00000214719 1007 ntBASIC24.12■■□□□ 1.45
Ptch1Q61115 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC24.12■■□□□ 1.45
Ptch1Q61115 AC159106.1-201ENSMUST00000224421 690 ntBASIC24.12■■□□□ 1.45
Ptch1Q61115 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Ptch1Q61115 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Ptch1Q61115 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC24.12■■□□□ 1.45
Ptch1Q61115 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Ptch1Q61115 Tfap2a-209ENSMUST00000225180 1828 ntBASIC24.12■■□□□ 1.45
Ptch1Q61115 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Ptch1Q61115 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Ptch1Q61115 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ptch1Q61115 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Ptch1Q61115 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ptch1Q61115 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ptch1Q61115 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ptch1Q61115 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
Ptch1Q61115 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC24.11■■□□□ 1.45
Ptch1Q61115 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ptch1Q61115 Gm13127-201ENSMUST00000118978 1389 ntBASIC24.11■■□□□ 1.45
Ptch1Q61115 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ptch1Q61115 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
Ptch1Q61115 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ptch1Q61115 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ptch1Q61115 Slc35b2-202ENSMUST00000223987 1766 ntBASIC24.11■■□□□ 1.45
Ptch1Q61115 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Ptch1Q61115 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC24.1■■□□□ 1.45
Ptch1Q61115 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
Ptch1Q61115 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Ptch1Q61115 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC24.1■■□□□ 1.45
Ptch1Q61115 Gm5682-201ENSMUST00000173402 505 ntBASIC24.1■■□□□ 1.45
Ptch1Q61115 Fcho2-208ENSMUST00000224992 2964 ntBASIC24.1■■□□□ 1.45
Ptch1Q61115 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Ptch1Q61115 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC24.1■■□□□ 1.45
Ptch1Q61115 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Ptch1Q61115 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Ptch1Q61115 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Ptch1Q61115 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Ptch1Q61115 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Ptch1Q61115 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Ptch1Q61115 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC24.1■■□□□ 1.45
Ptch1Q61115 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Ptch1Q61115 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Ptch1Q61115 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Ptch1Q61115 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC24.1■■□□□ 1.45
Ptch1Q61115 Gm14701-201ENSMUST00000117156 348 ntBASIC24.1■■□□□ 1.45
Ptch1Q61115 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Ptch1Q61115 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC24.09■■□□□ 1.45
Ptch1Q61115 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Ptch1Q61115 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
Ptch1Q61115 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Ptch1Q61115 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
Ptch1Q61115 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Ptch1Q61115 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Ptch1Q61115 Gm8655-201ENSMUST00000221159 852 ntBASIC24.09■■□□□ 1.45
Ptch1Q61115 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Ptch1Q61115 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.45
Ptch1Q61115 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC24.08■■□□□ 1.45
Ptch1Q61115 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Ptch1Q61115 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
Ptch1Q61115 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Ptch1Q61115 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC24.08■■□□□ 1.44
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms